Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g0054 ATGGAAGAAAATGGAACCTCTCTGGACTTTGAACTTGAACTTTTAAAGCATATAGATAGTATGAGTTGTAAAGAAGAGATGGAGAAGAGCTTGAAGTTCAAGAATCGGGAACAGCGAAATTCGGGGGTAACAGTAAGGCTGGAGAGAAGCAGAGGAGGCTCCCATTTTCTGAGCAAAGAGAAGCACAAAACTTGCGAGAAATCAAGGCTCAAGAAGGAGATGTCGTGGCAAACCTACGTCGATGAGCACCTTATGTGCGAGATCGAAGGTAATCATCTCTCTTCTGCGGCTATCCTTGGCCAAGACGGCAGCGTTTGGGCCCAGAGCTCTACTTTCCCTCAGTTGAAGCCTGAGGAGATAACTGCTGTTAATAATGACTTTGCGGAGCCTGGATCCCTTGCTCCAACTGGATTATATCTTGGTGGCACAAAATATATGGTGATTCAAGGTGAATCAGGAGCAGTCATTCGAGGGAAGAAGGGTCCCGGTGGTGTTACTGTCAAGAAGACTAATCAGGCCTTAATCATTGGCATTTATGATGAACCAATGACTCCAGGACAGTGCAACATGATAGTGGAAAGGCTTGGAGATTATCTTATTGATCAGGGTCTTTAA 615 0.4504 MEENGTSLDFELELLKHIDSMSCKEEMEKSLKFKNREQRNSGVTVRLERSRGGSHFLSKEKHKTCEKSRLKKEMSWQTYVDEHLMCEIEGNHLSSAAILGQDGSVWAQSSTFPQLKPEEITAVNNDFAEPGSLAPTGLYLGGTKYMVIQGESGAVIRGKKGPGGVTVKKTNQALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g0054 204 CDD PROF 75 203 IPR005455 GO:0003779
Bisa01g0054 204 Gene3D Dynein light chain 2a, cytoplasmic 72 204 - -
Bisa01g0054 204 Pfam Profilin 74 203 IPR005455 GO:0003779
Bisa01g0054 204 PRINTS Plant profilin signature 144 153 IPR005455 GO:0003779
Bisa01g0054 204 PRINTS Plant profilin signature 74 87 IPR005455 GO:0003779
Bisa01g0054 204 PRINTS Plant profilin signature 125 139 IPR005455 GO:0003779
Bisa01g0054 204 PRINTS Plant profilin signature 100 113 IPR005455 GO:0003779
Bisa01g0054 204 PRINTS Plant profilin signature 157 172 IPR005455 GO:0003779
Bisa01g0054 204 PRINTS Plant profilin signature 177 190 IPR005455 GO:0003779
Bisa01g0054 204 PRINTS Plant profilin signature 190 203 IPR005455 GO:0003779
Bisa01g0054 204 PRINTS Profilin signature 137 151 IPR005455 GO:0003779
Bisa01g0054 204 PRINTS Profilin signature 76 85 IPR005455 GO:0003779
Bisa01g0054 204 PRINTS Profilin signature 113 133 IPR005455 GO:0003779
Bisa01g0054 204 PRINTS Profilin signature 186 203 IPR005455 GO:0003779
Bisa01g0054 204 PRINTS Profilin signature 94 103 IPR005455 GO:0003779
Bisa01g0054 204 PRINTS Profilin signature 173 186 IPR005455 GO:0003779
Bisa01g0054 204 PANTHER PROFILIN 74 203 IPR005455 GO:0003779
Bisa01g0054 204 SMART prof_2 74 204 IPR005455 GO:0003779
Bisa01g0054 204 SUPERFAMILY Profilin (actin-binding protein) 75 203 IPR036140 -
Bisa01g0054 204 FunFam Profilin 74 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g0054 Bisa-ChrBisa01 883143 887050 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g0054 74 204 Cytoskeleton Gene Families AT4G29350 78.626 2.52e-79 231