Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g0050 ATGGACAAGAGTTGGATTCTAGCTTTACTCCTCCTTCTCCTCCATTTATGTCCGGCAAAAGCTTCCTTTGGTATTGGGGTTGGTGTTGGTGTAGGTGTAGGTGTAGGTGTAGGTGTAGGTGTCGGCAATGGAGGTGGAGGGACTAACAGCCCAGAGCCCCCTGGAGCTTCGACGTCAAAGATGGAGATAGCTTACACAGCTCTACAGGCTTGGAAATCAGCCATTACTGATGACCCATCAAAGATTTTAGATAGTTGGGTTGGTTCTAATGTGTGTTCTTATAGTGGGGTGTTTTGCGCGAATCCTGAAGATGAAAATGAAATGGCTGCATCAGGTGGTTCATTTATTGCAGGAATAGATCTTAACCACGCAAATCTTCAGGGAACTCTTGTCAAAGAGCTATCTTTACTCACGGATATGTCTGTTCTCCACCTCAACAGTAATAGGTTCGCAGGAACTGTTCCTGACACATTCAAAGACCTCTCGTCTCTTCAAGAGTTAGACCTCAGTAACAACCAACTTTCAGGTGGTTTTCCCGTTGTTACTTTGTACATTCCAAGTCTCATTTACTTGGACCTCAGATTCAACTCCTTCTCTGGACCCCTCCCCGAGCAACTCTTCGACAAAAATCTGGACGCAATATTTCTCAACAACAATCAATTCGAAGGTGAAATTCCCCAAAATTTGGGTAATTCCCCTGCTTCTGTCATAAACTTAGCTAACAACAAGTTCACTGGAAGCATCCCTGCTAGCTTGGGGTTTGTGGGTTCTAAGCTAAAGGAAGTCCTGTTCTTGAATAACCAGTTAACAGGTTGTATTCCTGAAGGAGTGGGGTTGTTCACAGATATACAAGTTTTGGATGTGAGCTTCAATTCGCTGATGGGTCATTTACCAGACACACTATCGTGTCTGCAAGACATAGAGGTCCTCAATTTGGCGCATAACAAGCTTTCGGGGGAATTATCAGACGTGATCTGCTCTCTCAGAAATTTACTGAACCTAACAGTTGCTTACAATTTCTTTAATGGGTTTAGCCAGGAGTGCTCGAGGCTTTTCTTCAGGAATGTGGGTTTTGATCTCTCAGATAATTGCATTCCAGGGAGGGACATGCAGAGACCTCAACCAGAGTGCTCTGTGATCCCAGGTGGTAGCCTAAGTTGTCTGAGAATCCCCACACCCAAGCCTCTTGTTTGTGCCTCACTGGCTGTAAGTACCTCTAAACACCCTCATCCCACTCCATCTTCATCTTCCCCCTGA 1257 0.4511 MDKSWILALLLLLLHLCPAKASFGIGVGVGVGVGVGVGVGVGNGGGGTNSPEPPGASTSKMEIAYTALQAWKSAITDDPSKILDSWVGSNVCSYSGVFCANPEDENEMAASGGSFIAGIDLNHANLQGTLVKELSLLTDMSVLHLNSNRFAGTVPDTFKDLSSLQELDLSNNQLSGGFPVVTLYIPSLIYLDLRFNSFSGPLPEQLFDKNLDAIFLNNNQFEGEIPQNLGNSPASVINLANNKFTGSIPASLGFVGSKLKEVLFLNNQLTGCIPEGVGLFTDIQVLDVSFNSLMGHLPDTLSCLQDIEVLNLAHNKLSGELSDVICSLRNLLNLTVAYNFFNGFSQECSRLFFRNVGFDLSDNCIPGRDMQRPQPECSVIPGGSLSCLRIPTPKPLVCASLAVSTSKHPHPTPSSSSP 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g0050 418 Pfam Leucine rich repeat 141 197 IPR001611 GO:0005515
Bisa01g0050 418 FunFam Leucine-rich repeat extensin-like protein 1 65 231 - -
Bisa01g0050 418 SUPERFAMILY L domain-like 66 365 - -
Bisa01g0050 418 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 53 413 - -
Bisa01g0050 418 PRINTS Leucine-rich repeat signature 304 317 - -
Bisa01g0050 418 PRINTS Leucine-rich repeat signature 164 177 - -
Bisa01g0050 418 Gene3D Ribonuclease Inhibitor 233 355 IPR032675 -
Bisa01g0050 418 Gene3D Ribonuclease Inhibitor 64 232 IPR032675 -
Bisa01g0050 418 Pfam Leucine rich repeat N-terminal domain 66 99 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g0050 Bisa-ChrBisa01 864190 865446 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g0050 60 389 Leucine-rich Repeat extension Gene Families AT3G24480 49.702 3.40e-108 326