Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g0027 ATGGGAACGGCAGATTTCTCCTCAGTCACTCCCAGTCCCAGGTTGAAGAGGGAAGAATGTAAACGAACGAAACACGATCCCAACTTCTCTGATTGGAAGATTCTCATTGGAACTTCTGATTGGGAGGACTATTTTCAAGGGAAGGAAGGATCAGCTAAATACAGAATTCATAACCTCCCTAAAAAATCAGGCCCAGGAGTATATGAGCTGGGTATTGCGGTGTCTCGCAGTGGGTTAGGGCGTGAGCTTTACAAGCTTGACCCAGACCGTATAGTTGTGGTTTACCTTGGTCAGGCTGACAATGTGAGAACCCGACTCCAGCAATATGGCCGCACTGGAGCTCATTTGGGCAATAGCTGTTCAAGTTACGACCCAGATGATTGTAATCCTATTTCTTTCCAAAAACGGCTGGGATTGTTTGAGGAGATATTTTTACAAGGCCTTCCAATTATTTATAGATGGGCTTCTATGCAAAACAAGGAAGATGCCAGGAAAACAGAAGGTGAATTGCTCAGTGTATTTGATTATGCGTGGAACACATGCAATAATGGTACACGTCGCCCTGATGATATTCTTCAAAAGCTTAGAAAGATTTCTTCAGGCCCTAGAATATTTTCAAAAATGGCCAGGGTGCTTCTACCTTTCACCCAGAAGCAAGCTGGTATCCCAATCAAATCAAGCAATCTGCCTACGCATGACAAATTACATGAAAGAGACGAAGGCACGTATAGTTTCTTATCTCCGGTATTTAAATTTAGCAGATCATCTCCTAGGATAGTTCAGGATATCCCCGGTGTCATTCAGGAGGATAGTACTAGATTTTGCGGAGTGGTCTTAGGTGATGGGTCAGTTTGTATAAGACCACCAGCTGAAGGAAGAATCAGGTGTTCTAAACACAAAGGAGCGAGAATAAAAGGGTCCACTGTGCAAACAATCAGGGCAATGAAATCAGAGAACATTCTGGGCCAAGAATCCAGTGTACATTGTCAACAAAAGGGCAAAGGCTACGGCGAACAAAATCTCAGCCATGATGTGAAAGACTCTCCACTAAAAGCAGTTGAGAGTCCTCTTGATGAGTTTCAGCAAAGTGTTATTTCAGAATCTGAAGTTGATGATGCGGAAAGCCCTCCACAAACAGCATTTGAAAGTCCGCTTGATGAAAGCATCACCAATATATGTGGGATCATTTTGAATGATGGTTCCCCTTGTAGAAGACCACCAGTCAAAGGGAGAAAAAGGTGCCATGAGCACAAAGGGAAGAGAATTCAAGTATCTAAGCATAAATCAGTGCTATGA 1296 0.4321 MGTADFSSVTPSPRLKREECKRTKHDPNFSDWKILIGTSDWEDYFQGKEGSAKYRIHNLPKKSGPGVYELGIAVSRSGLGRELYKLDPDRIVVVYLGQADNVRTRLQQYGRTGAHLGNSCSSYDPDDCNPISFQKRLGLFEEIFLQGLPIIYRWASMQNKEDARKTEGELLSVFDYAWNTCNNGTRRPDDILQKLRKISSGPRIFSKMARVLLPFTQKQAGIPIKSSNLPTHDKLHERDEGTYSFLSPVFKFSRSSPRIVQDIPGVIQEDSTRFCGVVLGDGSVCIRPPAEGRIRCSKHKGARIKGSTVQTIRAMKSENILGQESSVHCQQKGKGYGEQNLSHDVKDSPLKAVESPLDEFQQSVISESEVDDAESPPQTAFESPLDESITNICGIILNDGSPCRRPPVKGRKRCHEHKGKRIQVSKHKSVL 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g0027 431 MobiDBLite consensus disorder prediction 323 337 - -
Bisa01g0027 431 MobiDBLite consensus disorder prediction 323 343 - -
Bisa01g0027 431 Pfam GIY-YIG domain-containing protein 29 192 - -
Bisa01g0027 431 MobiDBLite consensus disorder prediction 404 431 - -
Bisa01g0027 431 PANTHER PROTEIN EFFECTOR OF TRANSCRIPTION 2-RELATED 371 429 IPR038909 GO:0003677|GO:0006355
Bisa01g0027 431 MobiDBLite consensus disorder prediction 1 22 - -
Bisa01g0027 431 MobiDBLite consensus disorder prediction 407 431 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g0027 392 422 HRT Transcription Factor Family AT5G56780 64.516 4.37e-07 50.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HRT Bisa01g0027 None None None