Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g0025 ATGGGAAGAAAGTGCTCACATTGTGGGAAAATAGGCCATAATTCTAGGACCTGCACATCTTTCAGATGGACTAATAACCATGCAGGACTTCGCCTCTTTGGTGTTCATCTAGATATATCCTCATCATCTTGTGTTGCCATGAAGAAAAGCATGAGCATGGACTCTTTGCCTTCATCATCATCATCATCATCATCATCATCATCATTTTCTAATTCATCCAGAATTGCTATTAATGAGAACTCTGACAGAACCTCTGTTGGGTATCTCTCAGATGGTCTCATAGATGCAGCCCAAGACAAGAGAAAAGGAGTAGCATGGACAGAAGAGGAGCACAGAAGATTCCTGATTGGATTGGAGAAGCTGGGAAAAGGAGATTGGAGGGGTATATCAAGAAACTATGTCACAACAAGAACCCCAACTCAAGTTGCTAGCCATGCTCAAAAGTACTTTCTTCGACTAGCATCCATCAATAAGAAGAGACGTTCAAGCCTCTTTGACATGGTGGGTTGCAGCAACACCGGGCTAGCAGTGTGTACAAAAGAGGAGAACAAATCCAAACATGAGGTTCAGAATGATGCTAGTTTGACATGGATAGGACTAAGCTGCTTTAAAAAGGAACAAGGTGCAGAAGACATGAGCATGTGGGTGCATTCCCAGACGGAATCTTCACCCTCATCGCCAGATCTGGAGCTCACTCTTGCTGCTTCTAACACCTTGCCACAAACCAAACCATCCCCCTCTCCCTTCCTTCTTCCCTCAATTAGCGTCACTTAA 774 0.4406 MGRKCSHCGKIGHNSRTCTSFRWTNNHAGLRLFGVHLDISSSSCVAMKKSMSMDSLPSSSSSSSSSSSFSNSSRIAINENSDRTSVGYLSDGLIDAAQDKRKGVAWTEEEHRRFLIGLEKLGKGDWRGISRNYVTTRTPTQVASHAQKYFLRLASINKKRRSSLFDMVGCSNTGLAVCTKEENKSKHEVQNDASLTWIGLSCFKKEQGAEDMSMWVHSQTESSPSSPDLELTLAASNTLPQTKPSPSPFLLPSISVT 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g0025 257 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 98 154 IPR017930 -
Bisa01g0025 257 ProSiteProfiles Zinc finger CCHC-type profile. 3 20 IPR001878 GO:0003676|GO:0008270
Bisa01g0025 257 CDD SANT 105 150 IPR001005 -
Bisa01g0025 257 NCBIfam myb-like DNA-binding domain, SHAQKYF class 102 152 IPR006447 GO:0003677
Bisa01g0025 257 SMART sant 102 152 IPR001005 -
Bisa01g0025 257 Gene3D - 104 156 - -
Bisa01g0025 257 PANTHER TRANSCRIPTION FACTOR KUA1 3 227 - -
Bisa01g0025 257 ProSiteProfiles SANT domain profile. 106 154 IPR017884 -
Bisa01g0025 257 ProSiteProfiles Myb-like domain profile. 98 150 IPR001005 -
Bisa01g0025 257 SUPERFAMILY Homeodomain-like 100 155 IPR009057 -
Bisa01g0025 257 Pfam Myb-like DNA-binding domain 105 150 IPR001005 -
Bisa01g0025 257 FunFam transcription factor MYB1R1 104 155 - -
Bisa01g0025 257 MobiDBLite consensus disorder prediction 237 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g0025 Bisa-ChrBisa01 488130 489120 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Bisa01g0025 Myb_DNA-binding 3.1e-11 CL0123