Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g0018 ATGAGGTGTTGGGAATCTTCACCTAGCCATGGAGTGGTAGCAGAAGCAGATGAACTGGGGAAGGCTCTCTCTGTTCTTCATAAACTGAGATTTGATTCCGTTAAGGCTCTAGTAGTTGGCTACTTCTCTCAACACGCCATGTCTTCTCGTTTAGCTGAGTACCGGGAGCACCTGCTAGTGGTAGATGTGAATTGCCAGAGTGATGGTATCCAATACAACCATCCCAAAATTCGGATACGAAACCTCACCAAAGTTTCCGATGCCGGCGTCCCCATTCTCAAGGGCATCAACTTGGACGTACCAAAAGGCGTCATCCTTGGCGTCATTGGGCCCAGTGGTAGCGGCAAATCCACGCTTCTCAGGGCCTTCAATCGCCTCTGGGAGCCACCCCCCGCCACCGTCTTTCTTGACGATTCCGATATCTGCCATCTCGATGTTCTCTCCCTCCGCCGTAAGGTCGGCATGCTCTTTCAGCTCCCCGCCCTCTTCCAAGGCACGGTTGCGGACAACGTGAGATATGGACCACAATTAAGAGGTAAAAAGCTAACGGATGAAGAGGTGCGTAAGTTGCTGATAACTGCGGATCTTGATGCTTCCTTCCTGAATAAGACGGGTGCTGAACTCTCTGTGGGTCAAGCTCAAAGAGTAGCACTTGCCAGGACGTTAGCTAATTCTCCTGAGGTTTTGCTGCTGGATGAGCCAACTAGTGCCTTAGATCCAATATCGACAGAAAACATAGAGGACGCCCTAATGAAGCTGAACAAGAATGGGGGCATGACAGTGATAATGGTGTCCCATAGCATCAAGCAAATCCAGAGGATAGCTGACTTAGTGTGCCTACTTGTTGATGGGGAAATCGTTGAAGTTCTGAAGCCTGATCAACTCTCCCAAGCCAACCATCCCATGGCTCGAAGGTTTCTTCAACTCAGTTCCTAG 936 0.5 MRCWESSPSHGVVAEADELGKALSVLHKLRFDSVKALVVGYFSQHAMSSRLAEYREHLLVVDVNCQSDGIQYNHPKIRIRNLTKVSDAGVPILKGINLDVPKGVILGVIGPSGSGKSTLLRAFNRLWEPPPATVFLDDSDICHLDVLSLRRKVGMLFQLPALFQGTVADNVRYGPQLRGKKLTDEEVRKLLITADLDASFLNKTGAELSVGQAQRVALARTLANSPEVLLLDEPTSALDPISTENIEDALMKLNKNGGMTVIMVSHSIKQIQRIADLVCLLVDGEIVEVLKPDQLSQANHPMARRFLQLSS 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g0018 311 Pfam ABC transporter 93 236 IPR003439 GO:0005524
Bisa01g0018 311 CDD ABC_PstB_phosphate_transporter 77 295 IPR005670 GO:0005315|GO:0016020|GO:0035435
Bisa01g0018 311 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 77 308 IPR003439 GO:0005524
Bisa01g0018 311 Gene3D - 73 310 IPR027417 -
Bisa01g0018 311 ProSitePatterns ABC transporters family signature. 208 222 IPR017871 GO:0005524|GO:0016887
Bisa01g0018 311 PANTHER ABC TRANSPORTER I FAMILY MEMBER 17 47 310 IPR005670 GO:0005315|GO:0016020|GO:0035435
Bisa01g0018 311 FunFam ABC transporter, ATP-binding protein 74 306 - -
Bisa01g0018 311 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 75 298 IPR027417 -
Bisa01g0018 311 SMART AAA_5 102 285 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g0018 Bisa-ChrBisa01 435578 437725 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g0018 90 309 Calmodulin-binding Proteins AT2G36910 31.034 2.71e-28 113