Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g0009 ATGGAGCTTTGGTTTGACGCCAAATCGTTCCAACATCAGAAGAGGCTAAATCGTTCCAACATCAGAAGAGGCCGGAGCTATGGTGCTTGGAGTTGGAGCTGATTCATGGGGATTTGCTTCAGCATTGATTCTGATACAAGGGATGCAGAATATGAATCTGCCAAATCAACAACTAAGCAACATAGAAGCGGAAGCTATACTCCATTATCTCCCATGAATATCAAAGATCTCCGCCAAAATCCTGGCTGTAGGGATGTTGATATATTTGCCTATGATGAACTGAGGCTGGCCACCAAGCACTTTCGTCCAGACTTAATTTTGGGAGAGGGTGGTTTTGGAGTTGTGTATAAAGGAGTGATAGATGAAAATGTAAGGCCAGGTTACAAGACCACTGAAGTTGCTATTAAGGAGCTAAATCGAGAAGGATTTCAAGGTGATAGGGAATGGCTGGCTGAAGTTAACTATTTAGGTCAATTCAGTCACCCAAATCTTGTGAAGCTCATTGGATACTGCTGTGAGGATGAACACCGCTTATTGGTCTATGAATACATGGCAAGTGGAAGCTTGGAAAGACATCTTTTTCGAAGAGTGGGCTCAACACTGACCTGGTCAAAAAGAATGAAGATTGCTTTACATGCTGCAAAAGGGCTTGCTTTTCTTCATGGTGCAGAAAGGCCCATCATATATCGCGACTTCAAGACATCAAATATTTTGCTAGATACGGATTTCAATGCAAAGCTTTCAGACTTCGGTCTTGCAAAGGATGGACCTATGGGTGACCAAACCCATGTTTCAACACGAGTAATGGGCACATACGGATATGCTGCTCCTGAGTATGTGATGACTGGCCATTTAACAGCTCGAAGCGATGTGTATGGTTTTGGGGTTGTGCTACTTGAGTTGCTTATTGGAAGGAGAGCATTAGACAAGAGCAGGCCCAGCAGACAACACAACTTGGTTGAGTGGGCACGTCCGTTATTGAATCATAATAAGAAACTGCTGAAAATTTTAGACCCTAGAATGGAAGGGCAATATTCTGCTAAAAGTGCAATAAAGGTGGCCCATCTGGCAAACCAATGTCTTAGCCAAAACCCAAAAGGCAGGCCTCTGATGAGCCAGGTTGTTGAAATTCTTGAAAATTTTCAGTCGAGGGAGGAAAATGAGGAAGAGCAAATGCTCCAAAGTGGCAGTAGCAGTATAACCATTTATGAGATTCCAAAGTGCACCAGAGAAATTCCAGAAATGGGGAAAAACCAATGTGAAAATGATGACGTTTATAGGAGCGAAGCAAGCAGAGAAAAAAGCAGGAGTGAGCCTTCAAATAATTATGACTTATCTAATCCTTCACCAGATTTCGTGCTCCACGATAAGTCAAGAGTCTAG 1383 0.4288 MELWFDAKSFQHQKRLNRSNIRRGRSYGAWSWSXFMGICFSIDSDTRDAEYESAKSTTKQHRSGSYTPLSPMNIKDLRQNPGCRDVDIFAYDELRLATKHFRPDLILGEGGFGVVYKGVIDENVRPGYKTTEVAIKELNREGFQGDREWLAEVNYLGQFSHPNLVKLIGYCCEDEHRLLVYEYMASGSLERHLFRRVGSTLTWSKRMKIALHAAKGLAFLHGAERPIIYRDFKTSNILLDTDFNAKLSDFGLAKDGPMGDQTHVSTRVMGTYGYAAPEYVMTGHLTARSDVYGFGVVLLELLIGRRALDKSRPSRQHNLVEWARPLLNHNKKLLKILDPRMEGQYSAKSAIKVAHLANQCLSQNPKGRPLMSQVVEILENFQSREENEEEQMLQSGSSSITIYEIPKCTREIPEMGKNQCENDDVYRSEASREKSRSEPSNNYDLSNPSPDFVLHDKSRV 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g0009 460 CDD STKc_IRAK 107 381 - -
Bisa01g0009 460 Gene3D Transferase(Phosphotransferase) domain 1 184 404 - -
Bisa01g0009 460 ProSitePatterns Serine/Threonine protein kinases active-site signature. 227 239 IPR008271 GO:0004672|GO:0006468
Bisa01g0009 460 Gene3D Phosphorylase Kinase; domain 1 76 183 - -
Bisa01g0009 460 PANTHER OS01G0588500 PROTEIN-RELATED 61 382 - -
Bisa01g0009 460 FunFam Serine/threonine-protein kinase BIK1 70 183 - -
Bisa01g0009 460 FunFam Probable serine/threonine-protein kinase PBL8 184 397 - -
Bisa01g0009 460 MobiDBLite consensus disorder prediction 413 439 - -
Bisa01g0009 460 Pfam Protein tyrosine and serine/threonine kinase 106 378 IPR001245 GO:0004672|GO:0006468
Bisa01g0009 460 MobiDBLite consensus disorder prediction 413 460 - -
Bisa01g0009 460 SUPERFAMILY Protein kinase-like (PK-like) 84 379 IPR011009 -
Bisa01g0009 460 ProSiteProfiles Protein kinase domain profile. 101 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g0009 460 ProSitePatterns Protein kinases ATP-binding region signature. 107 136 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g0009 Bisa-ChrBisa01 224845 232910 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g0009 89 378 Glycoside Hydrolase AT3G07070 51.536 2.74e-99 302
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Bisa01g0009 PK_Tyr_Ser-Thr 3.8e-47 CL0016