Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g01905 TATAATCTCCGGTCCTATGGTCTCAGCTCGGTACCTTCCAATGGCGCAGAGCATGAGAGACCTACAGCTGGCTTCCGTCGCAGCCGGCGGCCGCAAATCAACGGCTAGGATATCTGCCGATGAAGAATCCGGTGACCTTGAAGATGTACGGCTCTTGGATTCCTATGAAGGCAGAGACATTTCTAATGGAATTGAAGAAGGAATGAAGAGAATTCGGGTCAGAGTTACCGGCATGACCTGCGCTGCATGCTCAAATTCCGTAGAATCAGCTCTAAAAGCCGTCGATGGCGTGCTGAGCGCCTCCGTGGCTTTACTTCAGAATAAGGCTGACGTTGTTTTCAACCCAAGTCTGGTTAAGGATGAAGACATTAAAAATGCAATTGAAGATGCTGGGTTTGAAGCAGAAATATTACCTGAATCCAGTACAGTTGGATCAAAGCCACATGCAACCCTGGTGGGACAGTTTACTATTGGAGGTATGACGTGTGCAGCCTGTGTAAATTCTATTGAAGGCATATTAAGAGATCTTCCAGGGGTCAAAAGGGCTGTAGTAGCTTTGGCTACCTCCTTAGGAGAAGTTGAATATGATCCTAAGATTATTAGTAAAGATGAAATAGTCAATGCTATTGAAGATGCTGGTTTTGAAGGCTCATTTGTACAGAGCAGTGGGCAGGATAAAATCATTTTAGGTGTTGCTGGTGTATTCAGCCTGATGGAAGCACAATTTTTAGAAGGCATACTCAGCAGCATGGGAGGAGTAAGACAATTTCGTTTTGACCAGATATCTAGTGAATTGGAAGTTCTTTTTGATCCTCAAGTTCTCAGTTCTAGATCCGTAGTTGATGGCATTGAGGAGGCAAGCAATGGGAAGTTTAAATTACATGTTAGAAGCCCGTATACAAGAATGGTTTCTAAAGATGTAGTGGAGACCTCAACTATGTTTCGCCTTTTTATCTCCAGCCTCTTCCTTAGTATTCCTCTCTTCTTCATACGGGTAATTTGTCCTCATATACCAATTGTATATTCCTTGTTGCTATGGCGATGTGGGCCTTTTCTTATGGATGATTGGTTGAAGTGGGCATTGGCGAGTCTTATCCAATTTGTGGTTGGGAAGCGCTTTTACATTGCAGCTGGCAGAGCTCTTAGGAATGGTTCAACTAACATGGATGTCTTGGTTGCATTGGGAACTACAGCCTCTTATTTCTATTCCGTTTATGCTCTTCTGTATGGTGCTGTTACTGGGTTTTGGTCTCCTACATACTTCGAAACAAGTGCCATGCTCATAACATTTGTATTGTTGGGGAAGTATTTGGAATGTCTTGCAAAGGGAAAGACATCAGATGCCATCAAGAAGTTAGTAGAACTTGCTCCTGCAACAGCTTTATTGGTTATCAAAGACAAAGGTGGTAAATTTGTTGAAGAAAGGGAAATAGATTCTTTGCTCATTCAACCTGGTGACACACTAAAAGTTCTTCCTGGTACAAAGATTCCTGCTGATGGTATTGTTACATGGGGCTCAAGTTATGTAGACGAGAGCATGGTAACTGGTGAATCTGTACCTATTTTGAAGGAGGTGAATACATCTGTTATTGGGGGTACAATAAATTTACATGGTGTCCTTCACATTCAAGCAACCAAGGTAGGATCTGATACAGTTTTGAGTCAGATAATTAATTTGGTTGAGACAGCCCAGATGTCCAAAGCCCCCATTCAAAAATTTGCTGATTTTGTAGCTAGCATATTTGTTCCTGTGGTTGTTGCTCTGTCATTATTGACTTTATTGGGATGGTATATTGCTGGATCTCTTGGAGCTTACCCAGATGAATGGCTGCCCACAAATGGAAATCACTTTGTTTTTGCCCTTATGTTTGCAATATCTGTAGTGGTAATTGCATGCCCTTGTGCACTTGGCTTGGCAACACCAACTGCAGTGATGGTGGCAACAGGGGTCGGAGCAAACAATGGAGTGTTAATTAAAGGAGGAGATGCCTTGGAAAGGGCTCAAATGGTAAAGTATGTGATTTTTGATAAAACAGGCACCTTAACACAGGGAAAAGCCTCTGTTACTACCACCAAGGTATTCACAGGAATGGATCGTGGAGAATTTCTTAAATTGGTAGCATCAGCAGAGACTAGCAGTGAACACCCAATTGGAAAAGCAATAGTAGGATATGCACGTCATTTTCATTTCTTTGATGAGTCCTCTGCAACCAACAGTACCCAAGAAGATGCCAAGGAGTTCAAGTCTGGATGGCTTTTTGATGTCTTGGATTTCTCTGCTCTTCCAGGAAGAGGAGTCCAGTGCTTTCTAGATGGAAAGCGTATTCTGGTTGGTAACAGGAAGCTAATGGTTGAAAGTGGTATCACTATTCCAGATCATGTGGAAAAATTTGTGGTAGAACTGGAAGAAAGTGCAAAAACAGGGATATTGGTTGCATATGATGAGATCTTAACTGGAGTTTTAGGGGTAGCAGACCCACTAAAGAGAGAAGCTTCTGTGGTTATTGAGGGCCTTCAGAAAATGGGTGTCACACCAGTTATGGTGACAGGAGATAACTGGAGAACAGCCCGAGCTGTTGCCAAAGAGGTTGGCATTCAAGATGTTAGGGGAGAGGTTATGCCTGCGGGAAAGGCTGATGTTGTTCGTTCATTTCAAAATGATGGAAGCATAGTTGCAATGGTGGGTGATGGTATTAATGACTCTCCGGCATTAGCTGCTGCAGATGTTGGAATGGCGATTGGAGCTGGAACGGATATTGCAATAGAAGCTGCTGACTATGTTTTGATGAGAAATAATTTAGAAGATGTGATCACAGCCATTGATCTCTCCAGGAAGACCTTTTCTCGTATTCGATTAAACTATGTATTCGCAATGGCTTACAATGTCGTTGCTATACCAGTGGCTGCTGGGGTTTTCTTTCCTTCTCTAGGGATCAAGTTACCACCATGGGTTGCTGGTGCATGCATGGCTCTCTCATCTGTAAGTGTAGTATGCTCTTCCTTGCTTCTCCGGAGATATAAAAGGCCCAGACTCACTACAATACTTGAAATAACTGTAGAATGAGCATATAGGTTTTGGCTTCGAGGATACAAAATGGTTTTGATCAGGAGCCGGAATTCCAATTTTGTGCATTTTCTCTCTTCCTGCCTAAATTGGGGTGTAATTGTAATTGTACTTTCCCATTCATTGTAAATAAATGTACTTGTGTTAT 3212 0.425 MAQSMRDLQLASVAAGGRKSTARISADEESGDLEDVRLLDSYEGRDISNGIEEGMKRIRVRVTGMTCAACSNSVESALKAVDGVLSASVALLQNKADVVFNPSLVKDEDIKNAIEDAGFEAEILPESSTVGSKPHATLVGQFTIGGMTCAACVNSIEGILRDLPGVKRAVVALATSLGEVEYDPKIISKDEIVNAIEDAGFEGSFVQSSGQDKIILGVAGVFSLMEAQFLEGILSSMGGVRQFRFDQISSELEVLFDPQVLSSRSVVDGIEEASNGKFKLHVRSPYTRMVSKDVVETSTMFRLFISSLFLSIPLFFIRVICPHIPIVYSLLLWRCGPFLMDDWLKWALASLIQFVVGKRFYIAAGRALRNGSTNMDVLVALGTTASYFYSVYALLYGAVTGFWSPTYFETSAMLITFVLLGKYLECLAKGKTSDAIKKLVELAPATALLVIKDKGGKFVEEREIDSLLIQPGDTLKVLPGTKIPADGIVTWGSSYVDESMVTGESVPILKEVNTSVIGGTINLHGVLHIQATKVGSDTVLSQIINLVETAQMSKAPIQKFADFVASIFVPVVVALSLLTLLGWYIAGSLGAYPDEWLPTNGNHFVFALMFAISVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGDALERAQMVKYVIFDKTGTLTQGKASVTTTKVFTGMDRGEFLKLVASAETSSEHPIGKAIVGYARHFHFFDESSATNSTQEDAKEFKSGWLFDVLDFSALPGRGVQCFLDGKRILVGNRKLMVESGITIPDHVEKFVVELEESAKTGILVAYDEILTGVLGVADPLKREASVVIEGLQKMGVTPVMVTGDNWRTARAVAKEVGIQDVRGEVMPAGKADVVRSFQNDGSIVAMVGDGINDSPALAAADVGMAIGAGTDIAIEAADYVLMRNNLEDVITAIDLSRKTFSRIRLNYVFAMAYNVVAIPVAAGVFFPSLGIKLPPWVAGACMALSSVSVVCSSLLLRRYKRPRLTTILEITVE 1007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g01905 1007 FunFam Copper-transporting ATPase RAN1 668 760 - -
Bach9g01905 1007 Pfam E1-E2 ATPase 444 640 - -
Bach9g01905 1007 SFLD p-type atpase 643 933 IPR044492 -
Bach9g01905 1007 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 42 1003 - -
Bach9g01905 1007 CDD HMA 60 122 IPR006121 GO:0046872
Bach9g01905 1007 PRINTS P-type cation-transporting ATPase superfamily signature 828 838 - -
Bach9g01905 1007 PRINTS P-type cation-transporting ATPase superfamily signature 497 511 - -
Bach9g01905 1007 PRINTS P-type cation-transporting ATPase superfamily signature 806 817 - -
Bach9g01905 1007 PRINTS P-type cation-transporting ATPase superfamily signature 904 916 - -
Bach9g01905 1007 PRINTS P-type cation-transporting ATPase superfamily signature 661 675 - -
Bach9g01905 1007 PRINTS P-type cation-transporting ATPase superfamily signature 881 900 - -
Bach9g01905 1007 Gene3D - 429 551 - -
Bach9g01905 1007 SUPERFAMILY HMA, heavy metal-associated domain 141 208 IPR036163 GO:0046872
Bach9g01905 1007 SUPERFAMILY HMA, heavy metal-associated domain 52 126 IPR036163 GO:0046872
Bach9g01905 1007 SFLD C1.7: P-type atpase like 643 933 - -
Bach9g01905 1007 NCBIfam copper ion binding protein 141 202 IPR006122 GO:0005507
Bach9g01905 1007 NCBIfam copper ion binding protein 59 121 IPR006122 GO:0005507
Bach9g01905 1007 SUPERFAMILY Calcium ATPase, transduction domain A 461 547 IPR008250 -
Bach9g01905 1007 FunFam Probable copper-transporting ATPase HMA5 769 938 - -
Bach9g01905 1007 CDD P-type_ATPase_Cu-like 302 977 - -
Bach9g01905 1007 Gene3D - 140 205 - -
Bach9g01905 1007 ProSiteProfiles Heavy-metal-associated domain profile. 138 204 IPR006121 GO:0046872
Bach9g01905 1007 NCBIfam heavy metal translocating P-type ATPase 375 990 IPR027256 GO:0006812|GO:0016020|GO:0019829
Bach9g01905 1007 Pfam Heavy-metal-associated domain 142 202 IPR006121 GO:0046872
Bach9g01905 1007 Pfam Heavy-metal-associated domain 59 120 IPR006121 GO:0046872
Bach9g01905 1007 ProSitePatterns E1-E2 ATPases phosphorylation site. 663 669 IPR018303 -
Bach9g01905 1007 Gene3D - 628 938 IPR023214 -
Bach9g01905 1007 ProSiteProfiles Heavy-metal-associated domain profile. 56 122 IPR006121 GO:0046872
Bach9g01905 1007 PRINTS Copper-transporting ATPase 1 signature 83 106 - -
Bach9g01905 1007 PRINTS Copper-transporting ATPase 1 signature 57 82 - -
Bach9g01905 1007 PRINTS Copper-transporting ATPase 1 signature 112 132 - -
Bach9g01905 1007 FunFam Copper-transporting ATPase 1, putative 429 551 - -
Bach9g01905 1007 FunFam Copper-exporting P-type ATPase A 137 206 - -
Bach9g01905 1007 Gene3D - 55 126 - -
Bach9g01905 1007 CDD HMA 141 202 IPR006121 GO:0046872
Bach9g01905 1007 FunFam Copper-exporting P-type ATPase 761 812 - -
Bach9g01905 1007 FunFam Copper-exporting P-type ATPase A 54 124 - -
Bach9g01905 1007 SUPERFAMILY Calcium ATPase, transmembrane domain M 395 969 IPR023298 -
Bach9g01905 1007 NCBIfam HAD-IC family P-type ATPase 742 965 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Bach9g01905 1007 NCBIfam HAD-IC family P-type ATPase 414 682 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Bach9g01905 1007 SUPERFAMILY HAD-like 660 987 IPR036412 -
Bach9g01905 1007 Gene3D - 668 760 IPR023299 GO:0000166
Bach9g01905 1007 Gene3D - 761 812 IPR023299 GO:0000166
Bach9g01905 1007 ProSitePatterns Heavy-metal-associated domain. 144 173 IPR017969 GO:0046872
Bach9g01905 1007 Pfam haloacid dehalogenase-like hydrolase 657 895 - -
Bach9g01905 1007 ProSitePatterns Heavy-metal-associated domain. 62 92 IPR017969 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g01905 Bach-Chr9 27482533 27489811 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach9g01905 1 1007 Primary Pumps ATPases AT5G44790 76.083 0.0 1545
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g01905 K17686 - gmx:100804960 1656.73