Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g01869 ATGGGTGTGACTTCCAACACAGTGAGCAAGCAGAGGGGAAGCCTTTCGCAGCCAGTGCCGTCGCTTCCACCTTTCAATTACAGAGTGACAGTAAAGATGGCGTACGCAGCAATGAAGCCAACTAAGCCGGGTTTGGAGGAGAACCAGGAGCAGATTCACAAAATCAGGATCACCCTATCCTCCAAGCACGTGAAAAACCTTGAGAAGGTTTGTACTGACTTGGTTCGTGGAGCCAAGGATAAAAGGCTCAGGGTCAAGGGACCCGTGAGAATGCCCACCAAGGTTCTTAACATAACAACTAGAAAATCCCCTTGCGGTGAAGGTACCAACACATGGGACAGATTTGAGCTTCGGGTTCACAAAAGAGTGATTGACCTCTACAGCTCTCCAGATGTTGTTAAGCAGATTACCTCAATTACAATTGAACCAGGAGTTGAGGTAGAGGTCACAATTGCAGATGCCTGATCTGGCCTTCAATTTTTGTTACATACTAGTACTTTTATGTAATTTAACGTCTTTCTTGATTTCAATACTGTTATGGAGTAGGTTTGGTGTTATTTGCAGTTTGTTTAATTTTGCTTTAATTGTTACATTTTGGATACTTTCAAGTTGTTATTCCAGCACAATAGATTCTATTTATGTTATGCAAGCCATCGT 657 0.4277 MGVTSNTVSKQRGSLSQPVPSLPPFNYRVTVKMAYAAMKPTKPGLEENQEQIHKIRITLSSKHVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLNITTRKSPCGEGTNTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVEVTIADA 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g01869 154 MobiDBLite consensus disorder prediction 1 21 - -
Bach9g01869 154 Hamap 30S ribosomal protein S10 [rpsJ]. 52 151 IPR001848 GO:0003735|GO:0005840|GO:0006412
Bach9g01869 154 FunFam 40S ribosomal protein S20 39 153 - -
Bach9g01869 154 Gene3D Ribosomal protein S10 domain 38 153 IPR036838 -
Bach9g01869 154 PRINTS Ribosomal protein S10 family signature 54 67 IPR001848 GO:0003735|GO:0005840|GO:0006412
Bach9g01869 154 PRINTS Ribosomal protein S10 family signature 89 104 IPR001848 GO:0003735|GO:0005840|GO:0006412
Bach9g01869 154 PRINTS Ribosomal protein S10 family signature 111 125 IPR001848 GO:0003735|GO:0005840|GO:0006412
Bach9g01869 154 PANTHER 30S RIBOSOMAL PROTEIN S10 FAMILY MEMBER 32 153 IPR001848 GO:0003735|GO:0005840|GO:0006412
Bach9g01869 154 NCBIfam 30S ribosomal protein S10 53 151 IPR005729 GO:0003735|GO:0006412|GO:0015935
Bach9g01869 154 SUPERFAMILY Ribosomal protein S10 54 151 IPR036838 -
Bach9g01869 154 ProSitePatterns Ribosomal protein S10 signature. 78 93 IPR018268 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Bach9g01869 154 SMART Ribosomal_S10_2 56 150 IPR027486 -
Bach9g01869 154 Pfam Ribosomal protein S10p/S20e 56 150 IPR027486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g01869 Bach-Chr9 26678346 26682099 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach9g01869 33 154 Cytoplasmic Ribosomal Protein Gene Family AT3G47370 90.984 3.06e-78 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g01869 K02969 - gmx:100813093 237.269