Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g01854 CTTTCTCTCTCTATCTTTTTTATTTTTGATCTCTGACCTAATTGTCTATCTTCTTCTGAACAACATCACCACCACCGCCAACACCAACACCCAAAGACCACCCAAGATCCTAATAGAAGATACCTCCAAGTGGGTCTTTCTCAATTCTCTCACCCTCTCTTGTGGCTTTCCACCTAGATCTATCTTTGAGCTTCTTGCTAGGACTCATTGGCAAACAGAAATAGAGAGGCACACAAAGTTTTGCTAGTTTAGGAGATCAACAAGAGATTATATTGTATATCTAAGAGAAGGAGAATTTGTTTTCTTTGCTTTTTTTCTTTTGGAGGGTTTTGATCACAAAGTGTTGATTATCAGAGAAGAAAGATGACTCCAGCTAATTTGGCAGGACAGTTTGGTGACACCACATACACCAAGGTGTTTGTTGGAGGGTTGGCTTGGGAGACCCAGAAAGAGACCATGAAGAAGTATTTTGAACAGTTTGGTGAGATCTTGGAGGCCGTTGTCATCTCTGATAAAGCCACTGGAAGATCCAAAGGCTATGGATTTGTAACTTTTCGTGAGCCAGACGCAGCCATGAGAGCCTGTGTTGATGCTGCTCCTGTAATAGATGGTAGGAGGGCTAATTGTAACCTTGCTTCTTTGGGTGTTCAGAGATCTAAGCCTTCAACCCCGAAGCATGGAGGAGGAGGGAGAAACTTTAGGGTAATGGGTTCTTACCAGACAGGGTTTGGAGGAGGAGTGGGATCAGCTTTTGCTTCAGCAGCAACCTTCCCTCATTATGCTATCCAACAAGGGATACCTTATAATGTCTATAGGTACTCTCCATACTCGTCGGACTACACTTACCCTACGAGCTACTATAGCGTGTATGGAGCAGGAGCTACAGCTCAGTACCCACTGTATGGAACCGGACCAGGAGGGATGATGACTGGGGCTGCATCAGCCGCGGCATTTTACCCATATCTACAGCTTGGAGAAGGGAGTGGTGGCACCACCGGCGGCTATACTTCTGGGCAGGGTTACAGCGTCAACTATCCCCCGCAGCTCTTTCAGTATTCTCCCATTAGCTCCACTGCAGGGTATGCACAGCCCTATGGTGCACCCATGTCTCTTGCACCTTCAGCTGCCATGCAATCAGTGTGTTTTGCTGTGCCGCAGGCGTGACAATGGCTCCTCAAGCTCCAATTCCGCATCGCTAGAGATTCATTCTCGAACTTGCTATGCCAAAAATTCTCAGTTGCTTCTTTGAAGTCTCGTAATCCTTTGGCCTAACCATGGTGCTCTCTTTCACACATGCATGCACTCTTTCACTAACACAAAGAAAAAAGTCCATGAATGGCTTTTGGACTTTTGCACACATAAGAAGGCTCCCCATAGGGGCCGATAAAAAGTTCCTCCAAATTTGGAGAAATCATGCATTTTCCCCACTTTGCATATTTTTGAATGAAAAGGGTTCCTTGAAGAGAACCAAACACGTAAATCTATCATGACCAACTCAAGCTATAGGAAATAGCTAAGTTGGAAAAAGAATCCGAAAACTTAGCCTTGGAATGGTTAAGAAAGACAACCTTCTTGTGAACTTGAGCCCAAGAAGGGCCGAGTGAAAGTAAAGAATGGTTTCAAAAACTGTAAATTGGAGATGACAGTTAGGTAGATCGTCAGTTAGATCGTAGTTAGTTTTGCAAATAGATAATTCCCTCCAATCTTTGCTAATCACCCCTCCGGATGAAAGGGGCATTTTAGCAAAACATGGGCATTGGATGCCCAATCTTTTTTGTAAGGTAACATATAGCTAGTCTTAGGGTTTTAGTACTAGGACAAGTCATGTTTTTATAAATGCTTTTTACCAACTTTCACTTAATGGGTTTAACCAACCAACCAACCAACCAAATAACCCACCATCTTCCCTTGGGGTTAAGGGGAGGTAATCACTAACTTGTGTTTGTTTCTTGTAAATTCATTAATTAACTGTGGCTAAACTAAGGGAGTTTAAGCCCAATTTCACTAATTTTTAGGAGGGGTAGTGTTTCTTTTTATAGCAATGGCTATATAGCTTCTCTAGTACATTTCATCAACATATTGAGAACTACATCAATGGACGTAGATCTCATACCACACTTGCATATGTAACCCTGGGAGATATTTTGGTTCCCTTGGGTTCCTCACTGACCCACCAACCATGGTTAGGACATAGGTGAATCTCATCACTCTCTCTCTCTCTCTCTCTCTCTTTCTCTCTCTACCTCTTTCTTCCTCCCTCATGGCGCATTCTCTCTCCCTCTCTCTCTTTCTAGCTACTTTTCCATCGAGATGGACCTTGATATTCTATTAATTATATGCTTATAAGCCTATGGTTTGGATTGTAATCAGAAATCTTTAAGTAGGAAGATTAAGATTCATTCTCAATCATGATGGCTGAGAATGGATTTGCCACTTATTCTACTATGCTTTAAATTTGAGACTCTTATATGCTTACTTCTGTT 2483 0.4253 MTPANLAGQFGDTTYTKVFVGGLAWETQKETMKKYFEQFGEILEAVVISDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHGGGGRNFRVMGSYQTGFGGGVGSAFASAATFPHYAIQQGIPYNVYRYSPYSSDYTYPTSYYSVYGAGATAQYPLYGTGPGGMMTGAASAAAFYPYLQLGEGSGGTTGGYTSGQGYSVNYPPQLFQYSPISSTAGYAQPYGAPMSLAPSAAMQSGVTMAPQAPIPHR 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g01854 271 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 18 73 IPR000504 GO:0003723
Bach9g01854 271 Gene3D - 10 130 IPR012677 -
Bach9g01854 271 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 16 100 IPR000504 GO:0003723
Bach9g01854 271 PANTHER BOULE-RELATED 4 256 - -
Bach9g01854 271 SUPERFAMILY RNA-binding domain, RBD 12 113 IPR035979 GO:0003676
Bach9g01854 271 FunFam RNA-binding (RRM/RBD/RNP motifs) family protein 10 97 - -
Bach9g01854 271 CDD RRM_RBM24_RBM38_like 16 91 - -
Bach9g01854 271 SMART rrm1_1 17 89 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g01854 Bach-Chr9 26344480 26349910 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach9g01854 12 92 C2H2 Transcription Factor Family AT2G19380 43.210 1.07e-13 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g01854 - - aip:107629746 419.853
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach9g01854 9 26344480 26349910 Bach9g01854 9 26344480 26349910 ECH