Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g01848 GGGGAACAGCGTCCCCTGAAAACGGCGCCGTTAGAAATTCTTGAAACACCTTTGGCAACTCGTCTCCAGAGATGGCAAAGTTTTCCATTGATGGAGATGATGATGGGGAAGGACCCAGCAACCCCAGGCGAAAGAGGCAGAGGATTAGTGTTCTACTTGATACAGCTGGAGAAGATGTAGATGAACAAAGTGGAACAGAGGAAGAGGCTGTAGAAGAACTGGAAGAACTAGAAGGAGAAGAAAGTGAGCAGGAACATGAAGGGATGGAGAGTGAAGAAAATGATGATGATCCCACCTTTGTCAACAATGATGATAGTACTCCACTCAGAATAACATCAAATAACAGCGGTAGAGAGGATGCTGTTTCAGTGATGAATGATGATGATACTCTGCTCAGTGCGAGACTAAGATCAAATAACAGTGGTAGAGAGGATTCTGTTTCAGTGATGAAGGGTAGGGATAAATCCATCTCTGTGTTCCTTACTGACCCTGAAGTGCTTGATTGCTTCATTTGCTATGAACCCTTGAGCATTCCTGTCTTCCAGTGCGAAAATGGACATATTGCTTGCCCTTCCTGCTGTGCCAAACTTGGGAATAAATGTCCCATGTGTTCTATGCCAATAGGCTATAATCGATGCCGAGCTATTGAGAAGGTATTGGAATCTCTTAAAATTCCATGTCTAAATGCAACATATGGTTGTCAAGAGATATTGCGTTACAGTAAGAAATCTGATCACGAGAAGGAATGCATCTATACACCATGTGTTTGCCCACATTCAAGCTGCAACTTTATTTCGTCATCCAAGGAGTTAAGCGTCCACTTCAGCCACAAACACGAGGGTTTGGGAGTCCGTTTTCGCTATGACCACATTTTCTGTGTCTTTCTAGAGGTTACTGACAAAGCCATTGTTCTTCAGGATCAGGACGAGGGTGATCTTTTTATTCTCAACAATAGAGTTGAGTGTCTGGGCAATGTAGTCAGTGTTAGTTGCATTGCTCCCAACTCATCCAAGCCCGGTTTCCATTACGAAATTTTGGCCAAATTTCAAGGATACTGTCTGAAATTACAATCTTTTACCAGCAACTGCCAAGGCAGAATTGCTAATTCTTCTTCATCAGCGTTCCTTTTGATACCACCTGATTCTTCTGGGCAGCTAAAGTTGGACGTTTGCATAGGGCGCAATGTTAACTCATCCATATGTTTTACTTGTTGACATTTGTAAATATTACTTCAACTAAGCCTTTTTGGACGGTGACATGTTTTAGTTCATTTTTTCTTTTTCCTTTTTATGTATTTTTCCTTGTTAAGAAAACTAATTATGTGAAAATGTGAAATAGATAACAAAAAGTTCTCTGTTG 1359 0.4128 MAKFSIDGDDDGEGPSNPRRKRQRISVLLDTAGEDVDEQSGTEEEAVEELEELEGEESEQEHEGMESEENDDDPTFVNNDDSTPLRITSNNSGREDAVSVMNDDDTLLSARLRSNNSGREDSVSVMKGRDKSISVFLTDPEVLDCFICYEPLSIPVFQCENGHIACPSCCAKLGNKCPMCSMPIGYNRCRAIEKVLESLKIPCLNATYGCQEILRYSKKSDHEKECIYTPCVCPHSSCNFISSSKELSVHFSHKHEGLGVRFRYDHIFCVFLEVTDKAIVLQDQDEGDLFILNNRVECLGNVVSVSCIAPNSSKPGFHYEILAKFQGYCLKLQSFTSNCQGRIANSSSSAFLLIPPDSSGQLKLDVCIGRNVNSSICFTC 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g01848 380 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 193 251 IPR013083 -
Bach9g01848 380 MobiDBLite consensus disorder prediction 36 76 - -
Bach9g01848 380 Coils Coil 36 70 - -
Bach9g01848 380 MobiDBLite consensus disorder prediction 1 98 - -
Bach9g01848 380 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SINA-LIKE 4 75 369 IPR044286 -
Bach9g01848 380 CDD RING-HC_SIAHs 143 181 - -
Bach9g01848 380 MobiDBLite consensus disorder prediction 77 97 - -
Bach9g01848 380 Pfam Seven in absentia protein family 188 261 IPR018121 GO:0005737|GO:0006511|GO:0007275
Bach9g01848 380 ProSiteProfiles Zinc finger RING-type profile. 145 181 IPR001841 -
Bach9g01848 380 MobiDBLite consensus disorder prediction 1 28 - -
Bach9g01848 380 SUPERFAMILY TRAF domain-like 198 368 - -
Bach9g01848 380 SUPERFAMILY RING/U-box 144 187 - -
Bach9g01848 380 ProSiteProfiles Zinc finger SIAH-type profile. 198 256 IPR013010 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g01848 Bach-Chr9 26158804 26169932 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach9g01848 141 264 C3H Transcription Factor Family AT2G41980 38.168 7.98e-21 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g01848 K04506 - cave:132183012 347.821