Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g01793 ATGGGAACAGAAGGGCCTCCTGCCAACGATCATTGTTCGGTGTGCCATGGGAACTTCGACACTCCCTGCCAAGCCAATTGCTCTCACTGGTTCTGCGGAAATTGTATTATACGCGTGTGGGATTATGGATCAACTGTTTGGCCCTGTAAATGCCCCCTATGTCGTCGTCAAATTACTTTGTTGGTTCCATCTGAGGACTCTTTAAGACATAGCCATGACCCTGAAGTTGCTCAGATTCTAGGAAGGATTGAAACATATAATCGTTTATTTGGTGGGGGCACAATTGGTCTTATTCAGAGAATGCAAGACCTTCCTTTTCTTCTGCGAAGGCTACTACGGGAACTAATGGATCCTCATAGATCACTTCCTCCTCTGATTAGGGCTCGTGTCTATATTGCAATGATACTTAGTGCTGTCTACATTATTAGCCCTGTTGACATTATTCCAGAAGCGATATTAGGAGTAGTTGGTCTATTGGACGACCTGCTTGTTGTGCTTATGTGTTTCCTTCATGTTGCTGCGATTTATAGATCTGTACTTTACTTCCGGCATGGAGGAAGGGTCTGAGCCATGATACAGGTATAACTTGGTGGAACATGC 600 0.4467 MGTEGPPANDHCSVCHGNFDTPCQANCSHWFCGNCIIRVWDYGSTVWPCKCPLCRRQITLLVPSEDSLRHSHDPEVAQILGRIETYNRLFGGGTIGLIQRMQDLPFLLRRLLRELMDPHRSLPPLIRARVYIAMILSAVYIISPVDIIPEAILGVVGLLDDLLVVLMCFLHVAAIYRSVLYFRHGGRV 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g01793 188 ProSitePatterns Zinc finger RING-type signature. 27 36 IPR017907 -
Bach9g01793 188 SMART ring_2 12 54 IPR001841 -
Bach9g01793 188 SUPERFAMILY RING/U-box 10 61 - -
Bach9g01793 188 Pfam Protein of unknown function (DUF1232) 132 166 IPR010652 -
Bach9g01793 188 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 3 88 IPR013083 -
Bach9g01793 188 Pfam Zinc finger, C3HC4 type (RING finger) 12 54 IPR018957 GO:0046872
Bach9g01793 188 PANTHER UNCHARACTERIZED 4 184 IPR038896 GO:0061630
Bach9g01793 188 ProSiteProfiles Zinc finger RING-type profile. 12 55 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g01793 Bach-Chr9 21382454 21386710 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach9g01793 39 186 C3H Transcription Factor Family AT1G72175 75.676 1.16e-68 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g01793 K15707 - cave:132189255 296.204