Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g01725 ATGGCCTCCACTAACCCTTACCAAATCATTGACGACGATGATGAAGACGACGGCTTTGATTGGGAAGCAGCTGCAAGAGAAATCGATGAAGCTTGCCAATTGACGAATCCCTCAACTTCAATCAAATCTGAAAGTTGCGATGTTGCGAAAAATTCGAAGATTTGGGGTTCTAAGAGCGAAAAGAAACCCGGGGCTTCGCGGCAATCTACTCTTGATAAATTTGTGGGTAAGGAGGAAAAGCCTAAACCTCAGTTTGAGAATGGGAATAATGGTGGACAATATCGACAATGCGTTGAAGGTGATGAAATTGTGAACTTCGTTGACATTGACGCTGAGGCTGCCAAAGCTTGGATATACCCAGTTAATGTTCCGCGTCGTGACTATCAATTTTCTATCACCAAGTCAGCACTATTTTCGAACACATTGGTGGTGTTGCCAACAGGGCTTGGAAAAACACTCATTGCTGCAGTTGTTATGTATAACTACTTCAGATGGTTCCCCAAAGGCAAAATTGTGTTTGCTGCTCCTTCTCGACCACTTGTTATGCAACAGATTGAAGCATGCCATAATATTGTAGGAATACCTCAAGAATGGACAATTGATATGACCGGTCTGCTAAGTCCAGCCAAAAGAGCATGCTTTTGGAAAACCAAACGAGTTTTCTTTGTGACCCCACAAGTGTTCGAAAAGGATATTCATTCTGGCAAATGTTTGGTGAAAAATTTAGTTTGTTTGGTGATCGATGAAGCTCATAGAGCAATGGGAAATTACTCCTATTGTGAAGCAGTTCGTCAGCTAATGGCTGTACCAGTGCAACTGAGAATATTGGCTTTAACTGCAACACCAGGATCAAAGCAGCAGACGGTCCAGCAAGTTATTGATAATCTGCATATCTCCAAACTTGAATATCGCTGTGAAAGTGACCACGATGTCATCTCATTTGTCCACAATAGAAAGATGGAGTTGATCCAGGTTACAATGGGCCAAGATGCTGTAGAAATAAATAACAATATTCTTGAAGTAATACGACCAATCGTAGCCAGGCTTACTGCTCTTGGTGTTCTTCAGAATAGAGATTATCGTACTTTAAGCCCATGTGAATTACTTGAAATACGGGAAAAGTTTCGTCAAGCACATCCACCAGACGTTTCCCACGTCAACAATGTAGATGTGGAAGGATATTTTGGAGTCCTTATCACTCTATACTACATCCATAAGCTACTTTCAAGTCATGGAATAAGGCCAGCATATGAGATGCTTGAAAGAAAACTGAAGGAAGGGTTTTTTGCAAAATTTATGAGTAAAAATGAAGTTATTCTGAAAGCGAGACTCTTAATGCAGCAAAGCTTGTCTCATGGAGCACCAAGTCCTAAGTTGACCAAAATGCTAGAAGTTCTGATGCAACATTTCAAAACCATTGATGATCGAAGTTCAAGGGTTATCATTTTCTCAAATTACAGAGAAAGTGTCAGGGACATAATGGATTTGCTAGCAAATACTGGGGAACCAATTAGAGCAACGCAGTTTATTGGTCAAAGTTCAGGGAAAACATTGAAAGGCCAGTCTCAAAAAGTTCAACAGGCTGTGCTAGAGAAATTTCGTTCTGGTGCCTACAATGTCATTGTTGCTACATCAATTGGCGAAGAAGGTCTTGATATCATGGAAGTTGGTCTTGTTATTTGTTTTGATGCTAATGTCTCACCACTAAGAATGATTCAACGGATGGGGAGAACTGGAAGAAAGCACGATGGACGAATTCCCCATGTCTTTAAACCAGAAGCGGAATTTGTTAAGCTGTCGATTGAGAAGTTTATTCCTCGTGAAAAGAAAGCGAAAGATGACTCTCATCAGATGCCTGCATCCAAAGACAAGCTTACTGTTGCTGAGATTGATTTACTTTCAAAGTATTTTCATCCTGCTGTTGAAAATACATGGAGACCATCTCTTATTGCCTACCCTCACTTCCAGACATTTCCTTTAAGTGTGCATAAAGTGAATCATTCGCGTAGAACTATGATGTTGATAGATATGATGCAGCGTTTGCATGGAGTAGTATCATTTTCAGGAGACAGCAAAATTTCCACCCTTAAGGATGACCTGTGTTCAGGAAATAGCACACCAGCTAACATTATTGAGCTTGACAATGGTAGAAAAGATGATGAATTACATTCTAGGCATATATGTGGAAGCAGTACAGTCTCTGCAAATTGTCTGGAGTTGGACTCCTGTCAATTGGGGATTCAAACTGAAGACTTCGTTGATCTAACTGTGCAAGATAATACTGTTGAAGCACTAATATCTCCTAGGAAAAGTTGCATAAATAATGATGTTTTACCATCATCTGGATTTTGTGACTTAAGTAAGGATCAAGAGAAAACATGTGAAGGCAACGAGACAATTACTGAGTCTCCAATTGTGAACAAAAGAACGTCGAATAAAGGAGATGGTGTTGATGAGACCAATCTTGTGGAGATCACGACATCTTTATTGGAGGTGGATACTTGCAGCAATGACATGAGAGATGGAGAGCTTAGTCCTCGTTTAACTAATTTCATTACAAGCGGTGTTGTTCCAGAGTCTCCCAACGATGATAGTGGTGAGCGTTTTCTTGTCACAATAGGCTGGCCATCAAGAAATAAGTTTGTCATTCGGGATTGCATTTCACCCATTCACTGCCATGCAGAACAAGTTAACTCTTCAACTCCAGGGCAAAATGAAAAAGTCATTGTTGTTCCAGAGTCTCCCATTGATGAGAATGGGTTATTTGTAACTCAGGACTGCATTTTACCTATTCATTGCCATGAAGAACAGCAAGTTAAATCTTCAAGTCCAGGGAAAAATGAAAAAACCATTGCTGATAATGGCACTGATCAAAATAATGCCCCTTTTTCTCCAGTTGACAATAAACCTGAAACCCCTTTACTTGAGCTGAAGAATTGTGCAATTATAAGGGGGCGTGTCTTCCTTTCTCAAAACGTTCAGGAAGGCCAAACTCTTGTTACAAACCCAACAAATCATAACTTCAGTGAAGAATCGCATTTAAGTTGTGGAGAAATGTCTGGAAGTGTTAAACCAGTGCGCAAATTTAAAAGGTTGCGCAAAGTTGACAATACTAGAAGTAATAGGAATGAGAAAAGCATGAAGAGTTCTGCCCCAACAGCAAATCTTGTCAAATCATCAAGTACTTCTAATCTTGCAAGAGATAAGAATGACCAAGGTAAAAGAAAAGCAACACATGATGCCAGAGTCTTCATTGAGGAGGAAGCAGAGGTATCAGAAACTGATGGATCTGGTGATGAAGATGATGATGGCGATGACAATTCATTTGATAGTTTCATTGATGACAGGATGAATCCTACAGCAGCTAGTCAGCCTGAGGCTAGTAGAATAGACATGATGGCAATTTACAGGCGTTCTTTGCTCAGTCAAACACCAGCTGAAGCAGGGCTCAAATGTTTTGCATCTAGTCCTGACCAGGTGACTCCCATGACCAAAACTAGTGAAACTTTGGATTCTTCAGGCAAGACAGTGAGTTATCTCCAGACGGCTCAAACTGAGCAAACCAACCAGTCAAACTGTAGGAGTTTGGAATCTGTTCATATCAACCAAAATACTTCAGAAGCTGCAGCTTCAAGCAGTTCTTATGCAAGATCCAAGACTGAGATGACTAGTCGAAAAAGAAAATTGACATTCTATCATTCTAACAATTTTCCAACTATTAATCTTGAGCAGGAATTCACACTTCAATCAAACAAAGAATTGAAGGATGCCAATGCAACTTTGGATGTTCTCTGTGATGATCACTTATATGATGGCCTTGATCTTGATGAATTAGAGGCTCAAGCAACATCACTTCTAAAACAGAGATTAGACGTGGCAACACAGAAACAAGACACAATTCCCCATTCTCACTCACGGAACCTTAACCTTGTCAGTTCTCCATCATTTGACCTTGGGATTTGA 3963 0.4022 MASTNPYQIIDDDDEDDGFDWEAAAREIDEACQLTNPSTSIKSESCDVAKNSKIWGSKSEKKPGASRQSTLDKFVGKEEKPKPQFENGNNGGQYRQCVEGDEIVNFVDIDAEAAKAWIYPVNVPRRDYQFSITKSALFSNTLVVLPTGLGKTLIAAVVMYNYFRWFPKGKIVFAAPSRPLVMQQIEACHNIVGIPQEWTIDMTGLLSPAKRACFWKTKRVFFVTPQVFEKDIHSGKCLVKNLVCLVIDEAHRAMGNYSYCEAVRQLMAVPVQLRILALTATPGSKQQTVQQVIDNLHISKLEYRCESDHDVISFVHNRKMELIQVTMGQDAVEINNNILEVIRPIVARLTALGVLQNRDYRTLSPCELLEIREKFRQAHPPDVSHVNNVDVEGYFGVLITLYYIHKLLSSHGIRPAYEMLERKLKEGFFAKFMSKNEVILKARLLMQQSLSHGAPSPKLTKMLEVLMQHFKTIDDRSSRVIIFSNYRESVRDIMDLLANTGEPIRATQFIGQSSGKTLKGQSQKVQQAVLEKFRSGAYNVIVATSIGEEGLDIMEVGLVICFDANVSPLRMIQRMGRTGRKHDGRIPHVFKPEAEFVKLSIEKFIPREKKAKDDSHQMPASKDKLTVAEIDLLSKYFHPAVENTWRPSLIAYPHFQTFPLSVHKVNHSRRTMMLIDMMQRLHGVVSFSGDSKISTLKDDLCSGNSTPANIIELDNGRKDDELHSRHICGSSTVSANCLELDSCQLGIQTEDFVDLTVQDNTVEALISPRKSCINNDVLPSSGFCDLSKDQEKTCEGNETITESPIVNKRTSNKGDGVDETNLVEITTSLLEVDTCSNDMRDGELSPRLTNFITSGVVPESPNDDSGERFLVTIGWPSRNKFVIRDCISPIHCHAEQVNSSTPGQNEKVIVVPESPIDENGLFVTQDCILPIHCHEEQQVKSSSPGKNEKTIADNGTDQNNAPFSPVDNKPETPLLELKNCAIIRGRVFLSQNVQEGQTLVTNPTNHNFSEESHLSCGEMSGSVKPVRKFKRLRKVDNTRSNRNEKSMKSSAPTANLVKSSSTSNLARDKNDQGKRKATHDARVFIEEEAEVSETDGSGDEDDDGDDNSFDSFIDDRMNPTAASQPEASRIDMMAIYRRSLLSQTPAEAGLKCFASSPDQVTPMTKTSETLDSSGKTVSYLQTAQTEQTNQSNCRSLESVHINQNTSEAAASSSSYARSKTEMTSRKRKLTFYHSNNFPTINLEQEFTLQSNKELKDANATLDVLCDDHLYDGLDLDELEAQATSLLKQRLDVATQKQDTIPHSHSRNLNLVSSPSFDLGI 1320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g01725 1320 Pfam Helicase conserved C-terminal domain 472 581 IPR001650 -
Bach9g01725 1320 SMART helicmild6 492 582 IPR001650 -
Bach9g01725 1320 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 140 393 IPR027417 -
Bach9g01725 1320 MobiDBLite consensus disorder prediction 1000 1126 - -
Bach9g01725 1320 Gene3D - 121 315 IPR027417 -
Bach9g01725 1320 CDD FANCM_ID 332 441 IPR039686 GO:0006281|GO:0043138
Bach9g01725 1320 MobiDBLite consensus disorder prediction 1000 1016 - -
Bach9g01725 1320 FunFam ATP-dependent RNA helicase, putative 446 594 - -
Bach9g01725 1320 MobiDBLite consensus disorder prediction 938 970 - -
Bach9g01725 1320 MobiDBLite consensus disorder prediction 938 966 - -
Bach9g01725 1320 MobiDBLite consensus disorder prediction 1090 1109 - -
Bach9g01725 1320 CDD SF2_C_FANCM_Hef 456 586 - -
Bach9g01725 1320 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 465 626 IPR001650 -
Bach9g01725 1320 SMART ultradead3 121 314 IPR014001 -
Bach9g01725 1320 CDD DEXDc_FANCM 123 304 IPR044749 GO:0005524
Bach9g01725 1320 Pfam Type III restriction enzyme, res subunit 138 282 IPR006935 GO:0003677|GO:0005524|GO:0016787
Bach9g01725 1320 FunFam Fanconi anemia, complementation group M 120 315 - -
Bach9g01725 1320 MobiDBLite consensus disorder prediction 56 93 - -
Bach9g01725 1320 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 168 591 IPR027417 -
Bach9g01725 1320 MobiDBLite consensus disorder prediction 1068 1089 - -
Bach9g01725 1320 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 132 300 IPR014001 -
Bach9g01725 1320 MobiDBLite consensus disorder prediction 1044 1067 - -
Bach9g01725 1320 PANTHER FANCONI ANEMIA GROUP M FANCM FAMILY MEMBER 1 586 - -
Bach9g01725 1320 Gene3D hef helicase domain 329 450 - -
Bach9g01725 1320 Gene3D - 451 610 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g01725 Bach-Chr9 19789263 19801081 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach9g01725 413 580 Eukaryotic Initiation Factors Gene Family AT3G13920 26.923 1.18e-07 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g01725 K10896 - qsa:O6P43_030010 1400.57