Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g01721 ATGGGAAGGGGCAAGATTGAGATCAAAAGGATTGAGAACACCACTAATCGCCAAGTTACCTTCTGCAAGAGAAGAAATGGGCTTCTGAAGAAAGCTTATGAGCTCTCAGTTCTCTGTGATGCTGAAGTTGCCCTTATTGTCTTCTCCAGCCGTGGACGCCTCTATGAATACTCAAACAACAACATAAGGTCAACCATAGAGAGGTATAAAAAAGCCTGTTCTGATAACTCAAGTACAAGCTCTACTACTGAAATCAATGCTCAGTACTATCAACAAGAATCTGCAAAGCTACGACAGCAAATTCAGATGCTGCAAAATTCAAACAGGCATTTGATGGGTGATGCATTGAGCACACTGACTGTGAAGGAACTGAAACAGCTGGAGAATAGACTTGAAAGAGGAATCAATAGAATCAGGTCCAAGAAGCATGAGATGCTGCTGGCTGAAATCGAATATTTGCAGAAAAGGGAGATTGAACTGGAGAATGAAAATCTTTGCCTTCGAACTAAGATAGCAGAAGTTGAGAGGCTTCAACAAGCAAACATGGTTTCTGCACCAGAGCTGAATGCCATTCAAGCATTAGCTTCTCGCAATTTCTTCAATCCAACCATGATTGAAGGTGCGTCTGCATATCCACAACCAGACAAGAAGATTCTTCATCTTGGGTAA 669 0.4185 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNNNIRSTIERYKKACSDNSSTSSTTEINAQYYQQESAKLRQQIQMLQNSNRHLMGDALSTLTVKELKQLENRLERGINRIRSKKHEMLLAEIEYLQKREIELENENLCLRTKIAEVERLQQANMVSAPELNAIQALASRNFFNPTMIEGASAYPQPDKKILHLG 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g01721 222 Coils Coil 121 163 - -
Bach9g01721 222 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Bach9g01721 222 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Bach9g01721 222 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
Bach9g01721 222 FunFam agamous-like MADS-box protein AGL11 13 96 - -
Bach9g01721 222 ProSitePatterns MADS-box domain signature. 3 57 IPR002100 GO:0003677|GO:0046983
Bach9g01721 222 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
Bach9g01721 222 Pfam K-box region 85 171 IPR002487 GO:0003700|GO:0005634|GO:0006355
Bach9g01721 222 ProSiteProfiles K-box domain profile. 87 177 IPR002487 GO:0003700|GO:0005634|GO:0006355
Bach9g01721 222 Gene3D - 13 96 IPR036879 GO:0003677|GO:0046983
Bach9g01721 222 PANTHER SERUM RESPONSE FACTOR HOMOLOG 3 169 - -
Bach9g01721 222 Coils Coil 87 107 - -
Bach9g01721 222 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 10 57 IPR002100 GO:0003677|GO:0046983
Bach9g01721 222 CDD MADS_MEF2_like 2 75 IPR033896 GO:0000977|GO:0045944
Bach9g01721 222 ProSiteProfiles MADS-box domain profile. 1 61 IPR002100 GO:0003677|GO:0046983
Bach9g01721 222 SUPERFAMILY SRF-like 2 77 IPR036879 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g01721 Bach-Chr9 19747202 19753047 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach9g01721 1 222 MADS-box Gene Family AT4G09960 75.652 2.72e-123 347
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-MIKC Bach9g01721 K-box 3.6e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g01721 K09264 - gmx:100301905 405.601