Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g01672 CTCACAGTACTCAGAAATCAACTCAACCCCATTACCAGACACTCATTCACGCGAGAAACACCCCTTTCACTCGACAATCAGACCACTCCATCACAGTGCAGTCAACAATTTGAAGAAATCCGCAACAGACCCAAGCGTTGGAGCTTGAAAGCAAAGCTCTCTGATTAGCACCATCTTGGGTTAGGAAAAGAAGATGAAGCAGGTTGTAGGAACGGTGGTTTCAAATAAGATGCAGAAATCAGTGGTGGTGGCAGTGGATAGACTATTCCACCACAAATTATACAACCGTTACATCAAACGTACCTCTAAATTTATGGCACATGACGAGCAAAACCAGTGTAACATTGGCGACCGGGTTAGACTAGATCCTTCTAGGCCTTTGAGCAAGCGTAAACATTGGACTGTTGCTGAAATTCTCAAGAAAGCACGAATATATGTTCCACCCTCCACTCCAGCAACTCACAATCCACGCGCCAGTTCTCAATCACCCACTTCCTAGATTAACTGAAGGTCGGAACGAATAAGTTCAACTTATTCTCTTTGCCTGGTTTTCAGATCTAATAGGTATTGGCTGGTGGTTTGCAATGAAGCTGAAAAAACAGTTTAGTTTAGAGAAATTCTTATGTTGCAGTATTCCACATTTAATTTACTGTATGTGGTATCTCTACTGTTACCAACTAAGGCCAATTTTGAACCTCCCATTGTTTGCACTCTGACATTGTTTGTAAATTTACCTGCCAATATGGCACTGTCTTAGGTTTAAAACTTGGATCTTAATGGTGTTATGCCATTTTGCTGCAGTCCAGCATCACATAAACTCTTCTGATTGAATTTGAAAGGTTTCTCTGGTTGATCTTACTGCTATCTGTGAATATGAATGGTACCATTGTCCAAAG 896 0.4129 MKQVVGTVVSNKMQKSVVVAVDRLFHHKLYNRYIKRTSKFMAHDEQNQCNIGDRVRLDPSRPLSKRKHWTVAEILKKARIYVPPSTPATHNPRASSQSPTS 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g01672 101 Hamap 30S ribosomal protein S17 [rpsQ]. 1 76 IPR019984 GO:0003735|GO:0005840|GO:0006412
Bach9g01672 101 Gene3D - 1 97 IPR012340 -
Bach9g01672 101 SUPERFAMILY Nucleic acid-binding proteins 2 89 IPR012340 -
Bach9g01672 101 PANTHER 40S RIBOSOMAL PROTEIN S11 FAMILY MEMBER 1 80 IPR000266 GO:0003735|GO:0005840|GO:0006412
Bach9g01672 101 PRINTS Ribosomal protein S17 family signature 52 62 IPR000266 GO:0003735|GO:0005840|GO:0006412
Bach9g01672 101 PRINTS Ribosomal protein S17 family signature 20 43 IPR000266 GO:0003735|GO:0005840|GO:0006412
Bach9g01672 101 PRINTS Ribosomal protein S17 family signature 62 69 IPR000266 GO:0003735|GO:0005840|GO:0006412
Bach9g01672 101 FunFam 30S ribosomal protein S17 1 100 - -
Bach9g01672 101 MobiDBLite consensus disorder prediction 82 101 - -
Bach9g01672 101 NCBIfam 30S ribosomal protein S17 2 71 IPR019984 GO:0003735|GO:0005840|GO:0006412
Bach9g01672 101 Pfam Ribosomal protein S17 6 73 IPR000266 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g01672 Bach-Chr9 18786922 18790435 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach9g01672 6 75 Cytoplasmic Ribosomal Protein Gene Family AT4G30800 39.437 1.11e-06 42.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g01672 K02961 - sspl:121793650 169.859