Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g01643 ATGGCTGAGTATTCATCAAGTAACGGAACCCACGAGGCTGCCGTCAACATTAACGACGATCTCAATTGCACTGCCTCCAAAAACGAAAACTCAGGCATAAATGTAACTGTGCCTTTCTTGCAGAAGTTGGTAGCAGAGGTGGTGGGCACGTACTTCTTGATTTTTGCAGGTTGTGGTTCAGTGGTGGTGAATAGGGGAAACAATAACATCGTGACATTTCCAGGGATTGCAATAGTTTGGGGCCTGGTTGTGATGGTGCTTGTTTACTCTGTTGGTCATATCTCCGGTGCCCATTTCAACCCTGCTGTCACCCTTGCTTTTGCTTCCACCAGGAGGTTTCCATTGAAACAGGTACCAGCTTATATAGCAGCTCAGGTTCTGGGATCTACACTTGCAAGTGGGACCCTCAGATTGGTGTTTACTGGATCCCATGACTTCTTTGCAGGAACTACCCCAACAGGGTCTAATGTGCAATCTTTTGTGATTGAGTTCATCATCACTTTCTACCTCATGTTTGTTATTTCTGGAGTTGCCACTGATAACAGAGCTATTGGTGAACTAGCTGGGCTTGCAGTTGGGGCTACAATTCTTTTGAATGTGATGTTTGCAGGGCCAATCTCAGGGGCATCAATGAACCCAGCAAGAAGCTTAGGCCCTGCCCTTGTATCACATAAATATGACAGATTATGGATATACATGGTGTCACCAATTCTAGGCGCGGTTGCCGGCGCGTGGGTTTACAACATCGTAAGGTACACCGACAAGCCATTGCGTGAGATCACGAAGAGCGCGTCGTTCCTCAAGGCAGCCGGGAAGTGATTGCTCAAGCCAAAAGGGAATGTCAGGAACTTCATGTTCTAGCTTTGAAGAGTGTCATGTATTATATGAGCCATAAGAATAGTGTGATGTAATAATCTTGTAATAATACATACTAAGTTACGGAAATGAAGAGTGCAGTTCATGGCTTGTTT 971 0.4542 MAEYSSSNGTHEAAVNINDDLNCTASKNENSGINVTVPFLQKLVAEVVGTYFLIFAGCGSVVVNRGNNNIVTFPGIAIVWGLVVMVLVYSVGHISGAHFNPAVTLAFASTRRFPLKQVPAYIAAQVLGSTLASGTLRLVFTGSHDFFAGTTPTGSNVQSFVIEFIITFYLMFVISGVATDNRAIGELAGLAVGATILLNVMFAGPISGASMNPARSLGPALVSHKYDRLWIYMVSPILGAVAGAWVYNIVRYTDKPLREITKSASFLKAAGK 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g01643 272 FunFam Aquaporin NIP1-1 6 260 - -
Bach9g01643 272 PANTHER AQUAPORIN NIP2-1 23 267 IPR034294 -
Bach9g01643 272 Gene3D Glycerol uptake facilitator protein. 4 262 IPR023271 -
Bach9g01643 272 CDD MIP 41 250 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bach9g01643 272 PRINTS Major intrinsic protein family signature 162 180 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bach9g01643 272 PRINTS Major intrinsic protein family signature 41 60 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bach9g01643 272 PRINTS Major intrinsic protein family signature 80 104 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bach9g01643 272 PRINTS Major intrinsic protein family signature 117 136 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bach9g01643 272 PRINTS Major intrinsic protein family signature 193 215 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bach9g01643 272 PRINTS Major intrinsic protein family signature 230 250 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bach9g01643 272 Pfam Major intrinsic protein 36 247 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bach9g01643 272 SUPERFAMILY Aquaporin-like 36 261 IPR023271 -
Bach9g01643 272 NCBIfam MIP family channel protein 45 247 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bach9g01643 272 ProSitePatterns MIP family signature. 98 106 IPR022357 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g01643 Bach-Chr9 18294408 18297305 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach9g01643 41 269 Major Intrinsic Protein MIP AT5G37810 65.502 1.51e-108 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g01643 K09874 - aew:130754873 411.379