Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g01636 ATGGCTTCGGGGGCTATATTCTCCTCGCTGCGGCGGAGGAGGTCGCCATCGTTGGAGGCGTTTCTCGCTCCGGTTGACCTCACGGACGTTGCCCTGGTACAAACCCTTGTCTCTGTTGCCACCGAGGTCGTTTCCTTATTCTCCGAGTGCTCCTTCTTCTTCCAGCGCAAGAATTCCAGGTCGCTTATCAGAAAAGTGGAAATTTTTCAGCTGCTTTTGGAGTATTTCAGCAGTTCGGGTACGGTGCTTCCCCCAACTGCTTTGCTTTGTCTTAAAGAGCTCTATTTGCTGCTCTACCGGTCCAAGATTCTTCTCGACTATTGCACACGATCTAGTAAGTTGTGGCTTTTGCTTCAAAACCATTCAATTTCTGGTCATTTCCATGATTTGAACCAAGAAATTTCGACCCTTTTGGATGTTTTTCCCGTAAAGGATATTGAACTGAGTGAGGATGTTAGGGAGCAGGTTGAACTATTGCAGAAACAATCAAGGAGGGCTAAGTTGTTTATTGATAAAAAAGATGATGAACACAGGATTCGCTTTCTTTCTTTTCTTGATGAGTTTGAGAATGGGCGGATTCCTGATTGTGATGAATTGAGATTATTTTTTGTGGAGAAATTGCAGATTGTGGATGCCAGAAGTTGTAGAAATGAAATTGAGTCTTTGGAGGAGCAGATTGTAAATCATGAAGGAGATATTGAGCCAACAATTTCTGTGCTTAATGGGTTGGTTGCGATGACAAGGTATTGTAGATTTTTGCTTTTTGGATTTGAGGGTGAAGGCATGGATATGGGAAATGGAAATCAGAAAAAGCCTAAGCGGAGATTGATTACACAAGAAATTGCTGAAACATTCTTAACAATTCCAAAGGACTTTTGTTGTCCAATATCATGGGATTTGATGTCAGATCCAGTGATAATCTCCACAGGACAAACTTACGATAGAAGTTCCATATCCAGGTGGATGGAAGAAGGACATTGCACTTGTCCGAAAACGGGGCAAATGCTTGCTCACACTCGGCTTGTTCCTAACAGAGCTCTAAGGAATTTGATTGTGCAGTGGTGCACAGCACGTGGAATCCCCTTTGAAACACCGGAGGTCATTGATGCTTCAGCGGAAACTTTTGCATCAGCTTCTCCCACAAAAGCTGCCCTTGAAGCCAACAGGGCAACAGCATCGCTTCTCATTCATCAGTTGGCAAATGGGTCACAAGCTGCAAAGACTGTGGCTGCTCTGGAGATACGTTTGCTAGCAAAAACAGGCAAAGAAAATCGTGCATTCATTGCAGAAGCAGGGGCAATCCCCTATCTTCAGAGTTTACTTTCATCTCCTAATGCCATTGCACAGGAGAATTCTGTTACTGCTTTGCTCAATCTGTCAATTTATGAGAAAAATAAAAGTCGGATTATGGATGAGGAAGGGTGTCTGGGATCAATAGTTGATGTGTTGAGATTTGGGCACACAACAGAAGCAAGAGAAAATGCTGCAGCCACATTGTTTAGTCTATCTGCTGTCCATGACTATAAGAAGAGGATTGCAGATAAGTTTGGAGCTGTTGAAGCTCTTGCAATGCTGTTGCTAGAGGGAACACCACGAGGAAAGAAGGATGCTGTAACAGCTTTATTTAATCTATCAACACACAATGAGAATTGTGTTAGAATGATAGAAGCAGGGGCTGTAACAGCACTTGTTGGGGCTTTGATAAATACGGAAGTTGCTGAGGAAGCAGCTGGTGCCTTGGCCTTGATTGTTCGGCAGCCTATTGGGGCCAAAGCAGTGGTGGAGGAGGAAGCAGCAGTGGCTGGATTGATAGGAATGATGCGTTGTGGAACACCAAGGGGGAAGGAGAATGCTGTTGCAGCTTTGCTTGAGTTGTGCCGGAGTGGTGGCGCTGCAGCGACTGAAAGGGTGGTCAAGGCACCTGCTTTAGCAGGTTTGCTTCAAACACTGCTGTTTACGGGGACAAAGCGGGCAAGACGTAAAGCAGCTTCACTTGCCAGGGTATTTCAGAGATGTGAAAATGCATCTTTACATTATGGTGGATTAGGTGTAGGGTATGCATATGCCAGCAATTCAGCTGCAAATAGAGATACTAGCTTTGTTGGCGATGTTTCTGTACCAATGTCCATTTCCGTGCCTGTTTTGTAG 2148 0.4465 MASGAIFSSLRRRRSPSLEAFLAPVDLTDVALVQTLVSVATEVVSLFSECSFFFQRKNSRSLIRKVEIFQLLLEYFSSSGTVLPPTALLCLKELYLLLYRSKILLDYCTRSSKLWLLLQNHSISGHFHDLNQEISTLLDVFPVKDIELSEDVREQVELLQKQSRRAKLFIDKKDDEHRIRFLSFLDEFENGRIPDCDELRLFFVEKLQIVDARSCRNEIESLEEQIVNHEGDIEPTISVLNGLVAMTRYCRFLLFGFEGEGMDMGNGNQKKPKRRLITQEIAETFLTIPKDFCCPISWDLMSDPVIISTGQTYDRSSISRWMEEGHCTCPKTGQMLAHTRLVPNRALRNLIVQWCTARGIPFETPEVIDASAETFASASPTKAALEANRATASLLIHQLANGSQAAKTVAALEIRLLAKTGKENRAFIAEAGAIPYLQSLLSSPNAIAQENSVTALLNLSIYEKNKSRIMDEEGCLGSIVDVLRFGHTTEARENAAATLFSLSAVHDYKKRIADKFGAVEALAMLLLEGTPRGKKDAVTALFNLSTHNENCVRMIEAGAVTALVGALINTEVAEEAAGALALIVRQPIGAKAVVEEEAAVAGLIGMMRCGTPRGKENAVAALLELCRSGGAAATERVVKAPALAGLLQTLLFTGTKRARRKAASLARVFQRCENASLHYGGLGVGYAYASNSAANRDTSFVGDVSVPMSISVPVL 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g01636 715 SMART Ubox_2 291 354 IPR003613 GO:0004842|GO:0016567
Bach9g01636 715 ProSiteProfiles U-box domain profile. 287 361 IPR003613 GO:0004842|GO:0016567
Bach9g01636 715 Gene3D - 369 519 IPR011989 -
Bach9g01636 715 FunFam RING-type E3 ubiquitin transferase 364 685 - -
Bach9g01636 715 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 517 559 IPR000225 GO:0005515
Bach9g01636 715 Pfam Armadillo/beta-catenin-like repeat 422 460 IPR000225 GO:0005515
Bach9g01636 715 FunFam RING-type E3 ubiquitin transferase 287 362 - -
Bach9g01636 715 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 432 474 IPR000225 GO:0005515
Bach9g01636 715 Pfam U-box domain 288 357 IPR003613 GO:0004842|GO:0016567
Bach9g01636 715 SMART arm_5 506 546 IPR000225 GO:0005515
Bach9g01636 715 SMART arm_5 421 461 IPR000225 GO:0005515
Bach9g01636 715 SMART arm_5 547 585 IPR000225 GO:0005515
Bach9g01636 715 SMART arm_5 586 627 IPR000225 GO:0005515
Bach9g01636 715 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 287 361 IPR013083 -
Bach9g01636 715 Coils Coil 212 232 - -
Bach9g01636 715 SUPERFAMILY ARM repeat 392 669 IPR016024 -
Bach9g01636 715 SUPERFAMILY RING/U-box 276 361 - -
Bach9g01636 715 Gene3D - 27 144 IPR036537 GO:0007166
Bach9g01636 715 Gene3D - 520 672 IPR011989 -
Bach9g01636 715 PANTHER U BOX DOMAIN-CONTAINING 59 672 - -
Bach9g01636 715 CDD RING-Ubox_PUB 289 341 IPR045210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g01636 Bach-Chr9 18227591 18229738 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach9g01636 1 715 U-box Gene Family AT1G29340 70.981 0.0 959
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g01636 - - gmx:100811153 1153.66