Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g01581 ATGGCCATTGATGCAAGCCGTGGCCGGAAAAAGCCATCATCCAGAGGTCACCATAAGTTCGTCGGAGTACGGCAACGCCCCTCCGGAAGATGGGTTGCAGAGATCAAGGACTCTCTTCAGAAGGTTAGGCTCTGGCTTGGAACATTTGACACTGCAGAGGATGCAGCTCGTGCCTATGACACTGCTGCTCGAGCTTTGCGTGGCCCCACTGCTCGTACCAACTTCGATTTGCCGGAGCCTTCAGCCACCGGAGGTGGTGGTAGGCGCGGTGGTCGCTCACACTACATGCCAGATAGCATTGAGCCTTTTTCATTTGAGGAAGTGTGTGAACCAGGAGCAGATGCTGATGGCCTTCTTGGTGCACTCAAGGCCAAACTGTTTGATGAAAAAGGTGTCAAGGTTCCCTCACCTCTTTCTCTTTCTCTTTCTTCTGGTATTGTTTCTAGTTCAACCAGCAACCTTTCAGGGAACAATAAGAAAGAGTCGTCATCATCAGCTGCTCCTTTTGCCAATATGGTTGGAACCAGAAACCCTGCACTGGGTTTTACAAGCATTTTATCAAACACTTCTGCTAAGAGCACTGTGCTTGTCTCTGATCATGATGATTATGGAGGTTTTATAGCAGGAAATGGTGGAGTCAATTCCCATCAACCAAGCCAAGCCATGCCCATAACAAGCATGACTAATTGGTCCAATGAAATTGGTTATGAGTTGCCTTGGCCTCCACAGATGGGCATGGTTCCTCAAAGTGGAATGTTTTCCTCTTTAAGTGCAGCAACATCTACATGGCCCTTATCTGGGCTAACTGATCAGTCCATTAATGCAATTGGTATGACATATTCAGATCAATTGCCATCAACTAGTACCAGTAAGATCAGTGGCAAAGTAGTGGATATGGTAAGCATGCAATTGCCACAACTTGGTGCTCTGTCTGAAGGGTTTTGGGTACCTGACCAACAACAGTTTGTGCACTTTGAGAATAATAGTTGGTTGTCTGCTTCCAATGGGAATTGGGATCCCTTGCTCTATGTGCCTTCTGAGTTAGGTTAA 1050 0.4705 MAIDASRGRKKPSSRGHHKFVGVRQRPSGRWVAEIKDSLQKVRLWLGTFDTAEDAARAYDTAARALRGPTARTNFDLPEPSATGGGGRRGGRSHYMPDSIEPFSFEEVCEPGADADGLLGALKAKLFDEKGVKVPSPLSLSLSSGIVSSSTSNLSGNNKKESSSSAAPFANMVGTRNPALGFTSILSNTSAKSTVLVSDHDDYGGFIAGNGGVNSHQPSQAMPITSMTNWSNEIGYELPWPPQMGMVPQSGMFSSLSAATSTWPLSGLTDQSINAIGMTYSDQLPSTSTSKISGKVVDMVSMQLPQLGALSEGFWVPDQQQFVHFENNSWLSASNGNWDPLLYVPSELG 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g01581 349 Gene3D AP2/ERF domain 18 77 IPR036955 GO:0003700|GO:0006355
Bach9g01581 349 MobiDBLite consensus disorder prediction 70 94 - -
Bach9g01581 349 PRINTS Ethylene responsive element binding protein signature 20 31 IPR001471 GO:0003700|GO:0006355
Bach9g01581 349 PRINTS Ethylene responsive element binding protein signature 42 58 IPR001471 GO:0003700|GO:0006355
Bach9g01581 349 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 16 162 - -
Bach9g01581 349 CDD AP2 19 76 IPR001471 GO:0003700|GO:0006355
Bach9g01581 349 FunFam ethylene-responsive transcription factor RAP2-11 18 77 - -
Bach9g01581 349 MobiDBLite consensus disorder prediction 1 23 - -
Bach9g01581 349 Pfam AP2 domain 19 68 IPR001471 GO:0003700|GO:0006355
Bach9g01581 349 SUPERFAMILY DNA-binding domain 19 76 IPR016177 GO:0003677
Bach9g01581 349 ProSiteProfiles AP2/ERF domain profile. 19 76 IPR001471 GO:0003700|GO:0006355
Bach9g01581 349 SMART rav1_2 19 82 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g01581 Bach-Chr9 16920979 16922028 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach9g01581 7 75 AP2-EREBP Transcription Factor Family AT5G19790 67.143 8.32e-26 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bach9g01581 AP2 3.4e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g01581 - - gmx:102661478 300.441