Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g01562 ATGAAGCTCTTTTGCAGATTCCTGATTCTTCTGGCGCTGTTTGCTGTTGCCGAATCTTCATGCAACAGTACTATAGATTACCAGCTTCTCTCAAAGGCCTTTGAATCAGTTACTGGATTCAACATTTCCTGGTTCCAAACAGTGCCTAACAACTGTTCAATAAAGCTTCCCTCCAAGAACCTAACTGGTACCATCTCGTGGAGGTTTCTGAAGAACATGACCAATTTGCAGACACTTGATCTTTCTGAGAATTCTCTGCAAGGCTCTGTTCCAAGCTGGTTTTGGACACTTCCAAGCTTAAAGATGGTTAATTTAGCTCAAAACCGGTTCGGTGGCACCATTAGGTTCGGACTCACTTCAGAAAACGGCTCGTTTTCGCCGGTTGAATGGCTCAATCTTTCCCATAATAGGTTCACCAATCTGGTTCAGCTTTCTGGATTTTCTGAGGTGAAAGTTCTTAACCTTTCTCATAACAATTTCACGAATCTCCCGTCTGGGTTTCAAAATCTCACCAAGCTTCAGTACCTTGATCTGTCGCACTGCGGGATTAAAGCCAATGTGAAACCCATCTCTGTTCTACGACAACTCAACTACTTGGACTTGTCGCTCAACCATCTGAATGGTAGTTACCCTGCTGATTTTCCTGACACGAAAAAACTGACGTTTTTGAATATCTCGTTCAACAACTTCAACGCGACGGGTCGTTTAGGTCGATTTCCTAAATCAGCTTTCATTCAAGCCGGTAACAATTTCAATTACATTGCATCAAAAGTACCCCATCTTCATTCTCTAAAATCCCCATCCTCTCCCAACGAAAAACAAGCCTCGAAGGAGAAACCCAAGCACAAACACAAATCCAAATCCAAAACGCTGATTCTGGCGCTGTCGTTTGCTTCAGCAGCTGTGGTTATTCTCTTGTGTTTCTGGGTATTCTGCTGTTACAGAAGAAAGCAATTAGCCAAGAGGAACAAATGGGCAATCTCCAAACCGGTACCATTACCAGTCAAGATCGAGAAATCCGGGCCGTTCGCTTTCGAGACCGAATCGGGTACCTCGTGGGTAGCGGATCTTAAAGAACCAACGTCCGCACCGGTGGTCATGTTCGAGAAGCCGTTGATGAACCTTACCTTCAAGGACCTGATCGCTGCCACGTCACACTTCGGGAAGGACTCGCAGCTCGCAGAGGGAAGGTGTGGGCCCGTGTACAGTGCGGTCCTTCCAGGAGACATCCACGTGGCAATCAAGGTTCTGGAGAATGCCAAAGACGTTGATCATGATGACGCAGTGGCCCTGTTCGTTGACTTATCAAAGCTAAAGCATCCAAATCTGTTGCCTCTCTCCGGTTACTGTATTGCAGGTAAGGAGAAGCTAGTATTGTATGAGTTCATGTCAAACGGCGATTTGGGGAGGTGGCTACACGAGCTCCCCACTGGAGAAACTAACGTGGAGGATTGGAGTGGAGACACGTGGGAGATCCAAGACGGTGTTGGATCGCAAGCTTCCTCCCCGGAGAAAATGGGTTGGCTAACACGACATCGTATTGCCGTCGGGATAGCACGTGGTCTAGCCTATCTCCATCACGCCGGATCAAAACCTGTCGTCCACGGCCACTTAGTCACCTCAAATATCTTGCTCGCCGATGACTTCGAGCCCCGAATCGCCGATTTTGGGTTCCGAAAAATCGGGACACAAAACATTGGCGGCGGAAACTGCACTACCGAGACCGACGTGTACTGTTTCGGAGTAGTTTTAATGGAGCTCCTGACGGGGAAGCCCGGCACGGCGGAGACGGTGGTTTGGGTTCGGAAGCTAGTGAGGGAGAGGAACGGCGTGCGCGCGTTGGATGAGAGGTTGAAACTCGGTCAAGACTCGGAGGCGGAAATGGTGGAGAGCCTCCGAGTCGCGTACCTCTGTACGAACGAGTCACCTGGGAAAAGACCCACTATGCAACAGGTCATCGGTTTACTCAAAGACATTCATCCCCGTGGTGGATCCGACCCATATTGACGCAGTTCTCCCCACGCGATTGGAAGCGTCTGTTTTGCCCTTACCTGTTTGATTTAATTTTTAACACTGCGGTGATTGGGAGGAGTTTTGCACGCGCTGTTGGTGAGCATGGGCTTGGCAATGGGCCATGTTTTGATGTCTTTTTGAATCAATTTTGTTTTTCTAATTTTATGATGTATAGACAAAATATTTTAAAAAAGGGACAAAAAGAAAAAGTGAAAAAGAAAAAAAGTAAGACAAAAT 2250 0.4742 MKLFCRFLILLALFAVAESSCNSTIDYQLLSKAFESVTGFNISWFQTVPNNCSIKLPSKNLTGTISWRFLKNMTNLQTLDLSENSLQGSVPSWFWTLPSLKMVNLAQNRFGGTIRFGLTSENGSFSPVEWLNLSHNRFTNLVQLSGFSEVKVLNLSHNNFTNLPSGFQNLTKLQYLDLSHCGIKANVKPISVLRQLNYLDLSLNHLNGSYPADFPDTKKLTFLNISFNNFNATGRLGRFPKSAFIQAGNNFNYIASKVPHLHSLKSPSSPNEKQASKEKPKHKHKSKSKTLILALSFASAAVVILLCFWVFCCYRRKQLAKRNKWAISKPVPLPVKIEKSGPFAFETESGTSWVADLKEPTSAPVVMFEKPLMNLTFKDLIAATSHFGKDSQLAEGRCGPVYSAVLPGDIHVAIKVLENAKDVDHDDAVALFVDLSKLKHPNLLPLSGYCIAGKEKLVLYEFMSNGDLGRWLHELPTGETNVEDWSGDTWEIQDGVGSQASSPEKMGWLTRHRIAVGIARGLAYLHHAGSKPVVHGHLVTSNILLADDFEPRIADFGFRKIGTQNIGGGNCTTETDVYCFGVVLMELLTGKPGTAETVVWVRKLVRERNGVRALDERLKLGQDSEAEMVESLRVAYLCTNESPGKRPTMQQVIGLLKDIHPRGGSDPY 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g01562 668 Pfam Leucine rich repeat 128 183 IPR001611 GO:0005515
Bach9g01562 668 Pfam Leucine rich repeat 59 110 IPR001611 GO:0005515
Bach9g01562 668 MobiDBLite consensus disorder prediction 263 285 - -
Bach9g01562 668 ProSiteProfiles Protein kinase domain profile. 387 663 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach9g01562 668 Gene3D Ribonuclease Inhibitor 123 268 IPR032675 -
Bach9g01562 668 Pfam Protein tyrosine and serine/threonine kinase 390 560 IPR001245 GO:0004672|GO:0006468
Bach9g01562 668 SMART LRR_typ_2 147 169 IPR003591 -
Bach9g01562 668 SMART LRR_typ_2 73 96 IPR003591 -
Bach9g01562 668 SMART LRR_typ_2 193 216 IPR003591 -
Bach9g01562 668 Gene3D Phosphorylase Kinase; domain 1 347 462 - -
Bach9g01562 668 PRINTS Leucine-rich repeat signature 76 89 - -
Bach9g01562 668 PRINTS Leucine-rich repeat signature 193 206 - -
Bach9g01562 668 FunFam Putative LRR receptor-like serine/threonine-protein kinase 348 462 - -
Bach9g01562 668 SUPERFAMILY Protein kinase-like (PK-like) 365 656 IPR011009 -
Bach9g01562 668 Gene3D Transferase(Phosphotransferase) domain 1 463 663 - -
Bach9g01562 668 SUPERFAMILY L domain-like 44 234 - -
Bach9g01562 668 Gene3D Ribonuclease Inhibitor 17 122 IPR032675 -
Bach9g01562 668 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 53 659 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g01562 Bach-Chr9 16683485 16686578 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach9g01562 54 659 Receptor kinase-like Gene Family AT5G07280 31.636 1.16e-67 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Bach9g01562 PK_Tyr_Ser-Thr 1.2e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g01562 - - qsa:O6P43_012781 972.23