LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach9g01561	GCCCAATAAAGGTCAAAACTTTGAGCTCGATTCTCCTCCATCCATGGCGGGCGTTGCCTCCAAGAAGATCGAGACCAACTCAATTAGCTCTCAAAAGAAGGAGAACGGGAATCTTCTTCTGGGTCGCTTCGAAATCGGAAAACTCCTCGGTCATGGAACCTTTGCGAAGGTCTATTTTGCAAGAAACATCAAAACCAGTGAAGGGGTTGCCATCAAAGTCATCGACAAAGAGAAAATCCTAAAAAGTGGCTTGGTTGCTCACATCAAGCGCGAGATCTCCATTCTCCGCCGTGTCCGCCATCCCAACATTGTCCAACTGTTCGAGGTAATGGCTACAAAGGCGAAGATCTATTTTGTTATGGAATATGTTCGCGGTGGCGAGCTATTCAATAAGGTAGCCAAAGGGAGATTGAAGGAGGAAGTGGCAAGGAAATATTTTCAGCAATTGATTTCTGCAGTTGGGTTCTGTCACGCCAGAGGTGTTTACCATAGGGATCTCAAGCCTGAAAATTTGTTGCTTGATGAGAATGGTAATCTTAAAGTTTCTGATTTTGGTTTAAGTGCTGTTTCTGATCAAATTAGGCAAGATGGTTTGTTCCACACATTTTGTGGCACGCCTGCTTATGTTGCTCCTGAGGTTTTGGGGAGAAAAGGGTATGACGGGGTCAAGGTTGATCTTTGGTCCTGTGGGGTTATTTTGTTTGTGTTGATGGCTGGTTATTTGCCTTTCCATGATCAGAATATTATGGCAATGTATAAAAAGATTTACAAAGGGGAATTCAGGTGTCCTAGATGGTTTTCACCTGAGCTTTCTAATCTTCTTAGTGGTCTTCTTGTTACCAACCCAGAAAACCGGATTTCCATTCCAGATATTATGGAGAATAAGTGGTTCAAGAAAGGATTTAAACAAATAAAGTTTTATGTTGAAGATGATAGGGTGTGTAGTGTTGATGATAAGCTGAATTTAGATGATGATACAACATCACTTTCTGATTATTCCGTATCAGAATCTGATTCTGAATTAGAGACTAGAAGGAAGACTGCCTCGTTGCCCAGACCAGCAAGTTTGAATGCATTTGACATAATATCATTTTCTCCCGGTTTTGATCTGTCTGGGTTGTTTGAGGAGAAAGGTGATGAGACAAGATATGTAACTAGTGCACCAGTATCAAAGATTATATCTAAATTGGAGGAAATTGCCAATTTGTTTAGCTTTACTGTGAGGAAGAAAGATTGCAGAGTGAGCTTGGAGGGTTCAAGAGAAGGCGTAAAAGGGCCATTGACCATTGCTGCTGAGATATTTGAGTTAACACCTTCATTGGTGGTGGTGGAGGTTAAGAAGAAAGCAGGGGATAGAGCAGAATACGAGCAATTTTGTAACACTGAATTGAAACCTGGGCTGCAAAAATTGATGATGGAAGAATCTGCAACTTCTTCACAGCGAACTGCAAGTACTGAATCTTTGCCAGCACTACTTTCATGTAATGAACCTATGCTACGTTCAGATACCGAATCTTCATTCCCACATTCAGATACCGATCAATAGATGGCGGGCGTTGCCTCCAAGAAGATCGAGACCAACTCAATTAGCTCTCAAAAGAAGGAGAACGGGAATCTTCTTCTGGGTCGCTTCGAAATCGGAAAACTCCTCGGTCATGGAACCTTTGCGAAGGTCTATTTTGCAAGAAACATCAAAACCAGTGAAGGGGTTGCCATCAAAGTCATCGACAAAGAGAAAATCCTAAAAAGTGGCTTGGTTGCTCACATCAAGCGCGAGATCTCCATTCTCCGCCGTGTCCGCCATCCCAACATTGTCCAACTGTTCGAGGTAATGGCTACAAAGGCGAAGATCTATTTTGTTATGGAATATGTTCGCGGTGGCGAGCTATTCAATAAGGTAGCCAAAGGGAGATTGAAGGAGGAAGTGGCAAGGAAATATTTTCAGCAATTGATTTCTGCAGTTGGGTTCTGTCACGCCAGAGGTGTTTACCATAGGGATCTCAAGCCTGAAAATTTGTTGCTTGATGAGAATGGTAATCTTAAAGTTTCTGATTTTGGTTTAAGTGCTGTTTCTGATCAAATTAGGCAAGATGGTTTGTTCCACACATTTTGTGGCACGCCTGCTTATGTTGCTCCTGAGGTTTTGGGGAGAAAAGGGTATGACGGGGTCAAGGTTGATCTTTGGTCCTGTGGGGTTATTTTGTTTGTGTTGATGGCTGGTTATTTGCCTTTCCATGATCAGAATATTATGGCAATGTATAAAAAGATTTACAAAGGGGAATTCAGGTGTCCTAGATGGTTTTCACCTGAGCTTTCTAATCTTCTTAGTGGTCTTCTTGTTACCAACCCAGAAAACCGGATTTCCATTCCAGATATTATGGAGAATAAGTGGTTCAAGAAAGGATTTAAACAAATAAAGTTTTATGTTGAAGATGATAGGGTGTGTAGTGTTGATGATAAGCTGAATTTAGATGATGATACAACATCACTTTCTGATTATTCCGTATCAGAATCTGATTCTGAATTAGAGACTAGAAGGAAGACTGCCTCGTTGCCCAGACCAGCAAGTTTGAATGCATTTGACATAATATCATTTTCTCCCGGTTTTGATCTGTCTGGGTTGTTTGAGGAGAAAGGTGATGAGACAAGATATGTAACTAGTGCACCAGTATCAAAGATTATATCTAAATTGGAGGAAATTGCCAATTTGTTTAGCTTTACTGTGAGGAAGAAAGATTGCAGAGTGAGCTTGGAGGGTTCAAGAGAAGGCGTAAAAGGGCCATTGACCATTGCTGCTGAGATATTTGAGTTAACACCTTCATTGGTGGTGGTGGAGGTTAAGAAGAAAGCAGGGGATAGAGCAGAATACGAGCAATTTTGTAACACTGAATTGAAACCTGGGCTGCAAAAATTGATGATGGAAGAATCTGCAACTTCTTCACAGCGAACTGCAAGTACTGAATCTTTGCCAGCACTACTTTCATGTAATGAACCTATGCTACGTTCAGATACCGAATCTTCATTCCCACATTCAGATACCGATCAATAGAGGGTAAATTCTGAGTGAGAACAGAAAAGGGTATGTTTCTCTTTCTTCTTTATAGATTGTTGTCTACGGTAATTTTGTTTCTTCTACTCTCCCAGGGATTTTCCTGCGTTTAGGCTTGCTCCTTGACAGGAGTGTTAGATGCTTTTGTATCTATATATCCAATTATTGTAAGGAAGAAGGCTAATTTGAATATATTGAATGAAGTTCATTTT	3261	0.41	MAGVASKKIETNSISSQKKENGNLLLGRFEIGKLLGHGTFAKVYFARNIKTSEGVAIKVIDKEKILKSGLVAHIKREISILRRVRHPNIVQLFEVMATKAKIYFVMEYVRGGELFNKVAKGRLKEEVARKYFQQLISAVGFCHARGVYHRDLKPENLLLDENGNLKVSDFGLSAVSDQIRQDGLFHTFCGTPAYVAPEVLGRKGYDGVKVDLWSCGVILFVLMAGYLPFHDQNIMAMYKKIYKGEFRCPRWFSPELSNLLSGLLVTNPENRISIPDIMENKWFKKGFKQIKFYVEDDRVCSVDDKLNLDDDTTSLSDYSVSESDSELETRRKTASLPRPASLNAFDIISFSPGFDLSGLFEEKGDETRYVTSAPVSKIISKLEEIANLFSFTVRKKDCRVSLEGSREGVKGPLTIAAEIFELTPSLVVVEVKKKAGDRAEYEQFCNTELKPGLQKLMMEESATSSQRTASTESLPALLSCNEPMLRSDTESSFPHSDTDQ	500

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach9g01561	500	FunFam	Non-specific serine/threonine protein kinase	19	332	-	-
	Bach9g01561	500	FunFam	Non-specific serine/threonine protein kinase	339	457	-	-
	Bach9g01561	500	SUPERFAMILY	Protein kinase-like (PK-like)	25	324	IPR011009	-
	Bach9g01561	500	SMART	serkin_6	29	283	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bach9g01561	500	ProSitePatterns	Protein kinases ATP-binding region signature.	35	58	IPR017441	GO:0005524
	Bach9g01561	500	Pfam	Protein kinase domain	29	283	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bach9g01561	500	Gene3D	Kinase associated domain 1, KA1	338	458	-	-
	Bach9g01561	500	FunFam	Non-specific serine/threonine protein kinase	20	108	-	-
	Bach9g01561	500	Pfam	NAF domain	339	395	IPR004041	GO:0007165
	Bach9g01561	500	CDD	STKc_SnRK3	28	282	-	-
	Bach9g01561	500	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	147	159	IPR008271	GO:0004672\|GO:0006468
	Bach9g01561	500	CDD	CIPK_C	343	454	-	-
	Bach9g01561	500	ProSiteProfiles	Protein kinase domain profile.	29	283	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bach9g01561	500	MobiDBLite	consensus disorder prediction	458	500	-	-
	Bach9g01561	500	ProSiteProfiles	NAF domain profile.	337	361	IPR018451	GO:0007165
	Bach9g01561	500	PANTHER	CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED	17	448	-	-
	Bach9g01561	500	Gene3D	Transferase(Phosphotransferase) domain 1	19	337	-	-
	Bach9g01561	500	MobiDBLite	consensus disorder prediction	458	477	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach9g01561	Bach-Chr9	16658617	16660374	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bach9g01561	4	490	CBL-interacting serine-threonine protein kinases	AT4G18700	75.256	0.0	752

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CAMK_CAMKL-CHK1	Bach9g01561		Pkinase	2.4e-73	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach9g01561	-		-	gmx:100790133	793.882