Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g01458 ATGGACTTGAAGTCGAATCATACTCCTGTTCTCACTGATACTGCACCCATCATAACAAAGTCAAGACTAGGTGGGCATTCTAGTCTGTTGCCTTATTCACCCACAGGAGCACCAATCCCGCATGGTATGTTACTGACTATTCCAAGGAAGAAGACGGGAATTCTTGATGATGTTCGTTCAAGTGGGTGGCTGGATGCTATGAAATCATCTTCTCCTTCAGCCAAGAAGATTACAAAGGATAATCATGAGTTTGCATCAGCTGATGTTGATGATGCTTACAGCACTTGGCTGCTGAAGTATCCATCAGCGCTTACATCTTTTGAGCAAATAAAAAACCATGCAAAAGGCAAAAGAATAGCATTGTTTCTGGATTACGATGGAACTCTTTCACCAATTGTGGATGATCCTGACTGTGCTATCATGTCTGACAATATGCGTGCTGCTGTTAAAAAAGCAGCAGAATGTTTCCCAACGGCAATAATTAGTGGAAGAAGCCGTGACAAGGTAGTATATAATTTCGTAGGACTAACTGAACTCTATTATGCGGGTAGTCATGGAATGGACATCATTGGTCCAGTCAGACAATCTGTATCTGATAACCACCCTAATTGCATTAGGTCTACTGACAAGCAGTGCAGGGAAGTTAATTTGTTCCAACCTGCTGCTGAGTTCTTACCAATGATTGATGAGGTCCTTACATTGCTTGTTGAACGCACAAAAGAAATTGAAGGAGCATCAGTTGAGAACAATAAATTTTGTGTTTCTGTACATTACCGCAATGTAAATGAGGAGATTTGGGATATAGTGGGACAATGTGTCTATGATATTCTGAAGGACTATCCACGTTTACGACTAACTCATGGGCGCAAGGTTTTAGAGATTCGTCCCGTGATTGACTGGGATAAAGGGAAAGCAGTCACATTTTTACTTGAGTCACTTGGACTTAGCAATTGCGAAGATGTGCTCCCAATATATGTCGGAGATGACAGGACAGATGAAGATGCATTTAAGGTTTTGAGAGAGGGAACTAGAGGTTATGGCATCCTAGTGTCTTCTACGCCCAAGGAAAGCAGTGCAGTTTACTCTCTTCGTGATCCATCAGAGGTGATGGACTTTCTAAAGTCACTTGTGGTATGCACTTCAAGCTCCCAGAAAGGCCTCGTATAG 1167 0.4216 MDLKSNHTPVLTDTAPIITKSRLGGHSSLLPYSPTGAPIPHGMLLTIPRKKTGILDDVRSSGWLDAMKSSSPSAKKITKDNHEFASADVDDAYSTWLLKYPSALTSFEQIKNHAKGKRIALFLDYDGTLSPIVDDPDCAIMSDNMRAAVKKAAECFPTAIISGRSRDKVVYNFVGLTELYYAGSHGMDIIGPVRQSVSDNHPNCIRSTDKQCREVNLFQPAAEFLPMIDEVLTLLVERTKEIEGASVENNKFCVSVHYRNVNEEIWDIVGQCVYDILKDYPRLRLTHGRKVLEIRPVIDWDKGKAVTFLLESLGLSNCEDVLPIYVGDDRTDEDAFKVLREGTRGYGILVSSTPKESSAVYSLRDPSEVMDFLKSLVVCTSSSQKGLV 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g01458 388 FunFam Trehalose 6-phosphate phosphatase 227 386 - -
Bach9g01458 388 CDD HAD_TPP 120 370 - -
Bach9g01458 388 Gene3D - 119 210 IPR023214 -
Bach9g01458 388 Gene3D - 221 386 IPR023214 -
Bach9g01458 388 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 30 384 IPR044651 GO:0004805|GO:0005992
Bach9g01458 388 NCBIfam trehalose-phosphatase 116 377 IPR003337 GO:0003824|GO:0005992
Bach9g01458 388 FunFam Trehalose 6-phosphate phosphatase 221 297 - -
Bach9g01458 388 Pfam Trehalose-phosphatase 122 367 IPR003337 GO:0003824|GO:0005992
Bach9g01458 388 SUPERFAMILY HAD-like 120 377 IPR036412 -
Bach9g01458 388 NCBIfam HAD-IIB family hydrolase 121 341 IPR006379 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g01458 Bach-Chr9 13258016 13260781 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach9g01458 113 376 Trehalose Biosynthesis Gene Families AT1G70290 25.180 8.00e-11 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g01458 K01087 - gmx:100819495 632.484
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach9g01458 9 13258016 13260781 Bach9g01458 9 13258016 13260781 ECH