Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g01448 ATGGACGCTCTCGAATCGAACCCTAATCCCCCTCACCTGTCTCCATACGATCAAAATCCTCCTCCGCCGCCGCCTTCAGAGAATTTCATATCTAGTTACAGTTATGCATCGCAGCAATTTGAACAAGAAGTTGCGCCTTCTGATGTTCAAACACTATCGAAAACCTCAGATTCCGAAGGTCAGAACATGAACGGTGGTGCTCCCTCTAATGGCCACACCGATTACAGTATTACCAAGCCTTTGCTGTCGGAGAACGGGTTGACGAATACCCAGAGCGGCACCGACAAGGATCACTCCGGCGGTGAAGAGGAGACCACAAGCAGGCGCCGGCGACGGAGTCGGTGGGATCCACAGCCCGAGTCCAATGACCAGAGCGGTGGTGAATCAGGTAACGGAGCCAAGAAGAGGAAGTCTCGTTGGGCTGATGATGAGCCCAAGCCGGTGATTCAACTCCCTGATTTCATGGGTGGTATCGAATTTGATCCCGAAATTCAAGCTTTGAACAGTAGGCTCCTTGAGATTAGTCGAATGCTACAATCTGGTTTGCCTCTAGATGATCGCCCGGAAGGTGCTCGATCGCCTTCACCTGAACCTATATATGATAATATGGGAATCAGGATTAACACTAGAGAGTATCGTGCTCGTGAGAGATTGCAAAAGGAGAGACAAGAAATTATATCTCAGATTATAAAGAAAAACCCAGCTTTTAAGCCACCAGCAGATTATAGGCCACCCAAACTTCACAAGAAGCTTTATATACCAATGAAAGAGTACCCAGGTTATAATTTCATAGGGCTTATTATCGGTCCAAGAGGTAACACCCAGAAGCGGATGGAAAGAGAAACTGGTGCTAAAATTGTGATCCGTGGTAAAGGGTCAGTGAAAGAGGGTAGGTTGCAACAGAAGAGAGATTTGAAACCTGATCCTTCGGAGAATGAAGATTTGCACGTTTTAGTGGAGGCAGATACGCAGGAATCACTTGATGCTGCTGCAGGTATGGTGGAGAAACTCTTGCAACCTGTGGATGAGGTGTTGAATGAGCATAAGAGGCAACAGCTTAGAGAACTTGCTGCCTTGAATGGCACAATTAGGGATGAAGAATATTGCCGGCTGTGTGGTGAACCGGGTCATCGCCAATATGCATGTCCTACACGTACATCTACCTTTAAGAGTGAAGTTGTCTGTAAGCATTGTGGGGATGGTGGTCATCCGAGCATAGATTGTCCAGTGAAGGGTGCTACTGGGAAGAAGATGGATGATGAGTATCAGAACTTCCTGGCAGAGTTGGGAGGGACGGTGCCTGAATCAGTTACAAAGCTAAGCAGTACATTGGCCCTTGGTCCAGGAAATTCTGGGAACAATCCTCCTTGGGCTAACAATTCCAGCTCAACTGGTGGTTCAGCACACCCTGGACTAGGATCTAATCCAGTGAAAAAAGAAATTGATGATACCAATTTGTATATTGGTTATTTGCCTCCCACTCTTGATGATGATGGCCTGATCCAGTTGTTTCAACAATTTGGTGACATTGTTATGGCAAAGGTTATCAAGGATCGAGTGACAGGCTTGAGTAAAGGATATGGCTTTGTAAAATATGTTGATATTCAAATGGCTAATAATGCAATTGTGGCCATGAACGGTTATCGCTTAGAGGGTCGAACCATTGCAGTGAGGGTTGCTGGTAAGCCTCCTCAGCCGACTGTACCTCCTGGGCCCCCAGCATCAGCCATGCCTTCATATCCTGTTTCAACCCAGCCAGTTGGTGCTTATCCATCCCAACAATACGCTGGTGGTGGTCCCCTTGGGAGTGCACCTCCTCCAAGTTACGGAGGAACCCCAGTTCCATGGGGACCTCCTGTTCCTCCTCCATATGCACCTTATGCTCCTCCCCCTCCTGGGTCGACAATGTATCCTCCTATTCCAGGTCAGCCTATGCCCCTATATGGTGTGCAGTATCCTCCAGTACAGACAGGCCCGCCTGGTGCCCCATCCCAGCCTGCAACGTCCAGTGAAGCACAGCAGAGTTATCCTCCTGGAGTGCAGTCCGACAATAGTACCTCTACTCAATCGGTACCCACCAATCTGTATGGGAGCACAGTTCCTTCGATGCCACCTACAGCGCAACCTACATATCCTGCATCTTATGGTTATCCACCTTATTACAATGCAGTTCCTCCTCCACCTCCCCCACACGGCCCTGTCTCGACTTCAGATCAGTCCCAGGGCATTGGGAATGTGCCTTGGGCCACTAATCCTCCGGTGCCACCTCCTCCATCGGCAGAGAAGACAACATATGGTTCAGATCAATCCCAGGGCATTGGAAATGTGCCTTGGGCCACGAATCCTCCCGTGCCTCCTCCTCCTTCATCTGCGGAAAAGACAGCCTATGGTGCGGATTCAGAGTATGAGAAGTTCATGGCGGAGATGAAATGA 2433 0.4899 MDALESNPNPPHLSPYDQNPPPPPPSENFISSYSYASQQFEQEVAPSDVQTLSKTSDSEGQNMNGGAPSNGHTDYSITKPLLSENGLTNTQSGTDKDHSGGEEETTSRRRRRSRWDPQPESNDQSGGESGNGAKKRKSRWADDEPKPVIQLPDFMGGIEFDPEIQALNSRLLEISRMLQSGLPLDDRPEGARSPSPEPIYDNMGIRINTREYRARERLQKERQEIISQIIKKNPAFKPPADYRPPKLHKKLYIPMKEYPGYNFIGLIIGPRGNTQKRMERETGAKIVIRGKGSVKEGRLQQKRDLKPDPSENEDLHVLVEADTQESLDAAAGMVEKLLQPVDEVLNEHKRQQLRELAALNGTIRDEEYCRLCGEPGHRQYACPTRTSTFKSEVVCKHCGDGGHPSIDCPVKGATGKKMDDEYQNFLAELGGTVPESVTKLSSTLALGPGNSGNNPPWANNSSSTGGSAHPGLGSNPVKKEIDDTNLYIGYLPPTLDDDGLIQLFQQFGDIVMAKVIKDRVTGLSKGYGFVKYVDIQMANNAIVAMNGYRLEGRTIAVRVAGKPPQPTVPPGPPASAMPSYPVSTQPVGAYPSQQYAGGGPLGSAPPPSYGGTPVPWGPPVPPPYAPYAPPPPGSTMYPPIPGQPMPLYGVQYPPVQTGPPGAPSQPATSSEAQQSYPPGVQSDNSTSTQSVPTNLYGSTVPSMPPTAQPTYPASYGYPPYYNAVPPPPPPHGPVSTSDQSQGIGNVPWATNPPVPPPPSAEKTTYGSDQSQGIGNVPWATNPPVPPPPSSAEKTAYGADSEYEKFMAEMK 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g01448 810 MobiDBLite consensus disorder prediction 587 610 - -
Bach9g01448 810 SMART kh_6 247 339 IPR004087 GO:0003676
Bach9g01448 810 SMART c2hcfinal6 368 384 IPR001878 GO:0003676|GO:0008270
Bach9g01448 810 SMART c2hcfinal6 394 410 IPR001878 GO:0003676|GO:0008270
Bach9g01448 810 MobiDBLite consensus disorder prediction 662 704 - -
Bach9g01448 810 MobiDBLite consensus disorder prediction 719 734 - -
Bach9g01448 810 FunFam splicing factor-like protein 1 239 367 - -
Bach9g01448 810 MobiDBLite consensus disorder prediction 130 146 - -
Bach9g01448 810 MobiDBLite consensus disorder prediction 648 810 - -
Bach9g01448 810 SUPERFAMILY RNA-binding domain, RBD 479 574 IPR035979 GO:0003676
Bach9g01448 810 SUPERFAMILY Retrovirus zinc finger-like domains 365 411 IPR036875 GO:0003676|GO:0008270
Bach9g01448 810 FunFam splicing factor 1 367 420 - -
Bach9g01448 810 ProSiteProfiles Zinc finger CCHC-type profile. 369 383 IPR001878 GO:0003676|GO:0008270
Bach9g01448 810 PANTHER RNA-BINDING PROTEIN RELATED 99 605 IPR045071 -
Bach9g01448 810 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 484 562 IPR000504 GO:0003723
Bach9g01448 810 MobiDBLite consensus disorder prediction 13 28 - -
Bach9g01448 810 Gene3D - 161 239 IPR047086 -
Bach9g01448 810 Gene3D K Homology domain, type 1 244 366 IPR036612 GO:0003723
Bach9g01448 810 Gene3D - 454 567 IPR012677 -
Bach9g01448 810 SMART rrm1_1 485 558 IPR000504 GO:0003723
Bach9g01448 810 Gene3D - 367 420 - -
Bach9g01448 810 MobiDBLite consensus disorder prediction 292 312 - -
Bach9g01448 810 MobiDBLite consensus disorder prediction 442 470 - -
Bach9g01448 810 MobiDBLite consensus disorder prediction 1 150 - -
Bach9g01448 810 FunFam splicing factor-like protein 1 464 566 - -
Bach9g01448 810 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 486 555 IPR000504 GO:0003723
Bach9g01448 810 ProSiteProfiles Type-1 KH domain profile. 262 334 - -
Bach9g01448 810 MobiDBLite consensus disorder prediction 442 476 - -
Bach9g01448 810 Pfam KH domain 262 310 IPR004088 GO:0003723
Bach9g01448 810 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 247 373 IPR036612 GO:0003723
Bach9g01448 810 MobiDBLite consensus disorder prediction 96 118 - -
Bach9g01448 810 Pfam Splicing factor 1 helix-hairpin domain 136 243 IPR032570 -
Bach9g01448 810 ProSiteProfiles Zinc finger CCHC-type profile. 395 409 IPR001878 GO:0003676|GO:0008270
Bach9g01448 810 MobiDBLite consensus disorder prediction 762 777 - -
Bach9g01448 810 MobiDBLite consensus disorder prediction 29 95 - -
Bach9g01448 810 CDD KH-I_BBP 246 339 - -
Bach9g01448 810 MobiDBLite consensus disorder prediction 183 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g01448 Bach-Chr9 13127345 13129777 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach9g01448 484 675 Eukaryotic Initiation Factors Gene Family AT3G16380 28.641 1.31e-11 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g01448 K13095 - qsa:O6P43_029889 1180.24