Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g01418 ATGTACATCAAAGAGGTCTGCTTAGAGGGTTTTAAGTCATATGCTAATAGAACTGTTGTCCCGGGGTTTGACCCTTTCTTCAATGCCATTACGGGGTTGAATGGTTCGGGCAAGTCGAACATACTCGATTCGATTTGCTTTGTGTTGGGTATCACGAATTTGCAACAGGTCCGAGCTTCCAACCTTCAGGAGCTCGTGTATAAGCAAGGACAAGCAGGGATTACGAAGGCCACAGTGTCGATTGCGTTTGATAATTCGGATAGGAGTCGAAGCCCATTTGGATATGAAGATCATCCAGAGATTACAGTCACGAGACAGATTATTGTTGGAGGGAGGAACAAATATTTGATCAATGGGAAACTTGCCCAGCCAAGTCAAGTTCAGAACCTTTTTCATTCGGTGCAGCTTAACGTTAATAACCCACATTTCCTCATAATGCAAGGGCGCATCACCAAGGTTTTAAATATGAAACCACCTGAGATATTATCTATGCTTGAGGAAGCTGCGGGGACGAGAATGTATGAATCTAAGAAAGAGAATGCTCTGAAAACACTTGAGAAGAAGCAGAATAAGGTAGATGATATTAACAACCTTCTTGATCGGGAGATAATACCTGCACTGGAAAAGTTAAGGAAGGAAAGGATGCAGTACATGCAATGGGCAAATGGCAATGCTGAGTTAGACAGGTTGAGAAGGTTTTGTATTGCTTATGAATATGTGCAAGCAGAGAGGATTAGAGACAGTGCTGCAACCGAGTTAGAACAAGTAAAGGCCAAGATGGCTGGGATTGATGACAATAATACGAAGAATCAAGCAGAAGTAGAGGAAATGGAGAAAAAAGTAGCAGAGTTGACCGCAGAAAAGGAAGCACGCATGGGTGAAGAAGTAAAATCTTTGTCGGACAAGGTGGATGCACTTGCCCAGGATCTTGTGAGAGAGACCTCTGTACTGAATAATAAAGAGGACACTCTGAGGAGTGAAAAAGCCAATGAACAAAATATTGTTAGTAATATTGAAGACCTGAAGCAATCTATAGAAGCGAAGGCCTCTGCTGTTAAAAAGGCTGAAGAGGGAGCTGCTGATCTGAAGAAGAAAGTTGATGAGCTTTCTAAGAGCCAGCAGGAGCATGAAAAGGAGTACCAGGGTGTATTAGCTGGAAAGAGCAGTGGAAATGAGGAGAAATGCTTAGAGGATCAGCTGGCTGATGCAAAAGTTGCAGTTGGGAGTGCTGAAACAGAACTGAAACAGTTGAAGACTAAAATTAGCCACTGTGAAAAGGAACTGAAAGAGAAAAGTAATCAATTAAGGTCAAAACGTGAAGAAGCTATTGCTGTAGAAAATGAGCTCAATGCAAGAAGAAAAGATGTTGAAAATGCCAAAATGGAGTTGGAGTCTCTTCCTTACAAAGAGGGAGAGATGGAAGCTTTGCAAAAGGAACATACTTCTGAGATGGAGGGTGTGCAAAAGTGGAAGGATGAAATACGCAATCTTTCAGCTCAATTAGCAAATGTTGAATTCACATACCGTGATCCGGTCAAGAATTTTGACAGGTCAAAAGTGAAGGGTGTGGTTGCAAAACTTATCAAAGTAAAGGATAGATCCACAATGACTGCCCTAGAGGTTACTGCTGGTGGAAAGTTGTTTAATGTTGTAGTTGACGCTGAAACTACTGGAAAGCAGCTTCTGCAGAATGGTGATCTAAGAAGAAGAGTAACAATTATACCTTTGAACAAAATACAACCTCATACTGTTCCTTCTAGGGTTCGAGAAGCTGCTTCTAGAATAGTTGGCAAGGAGAGTGCTGAACTGGCACTTTCTTTGGTTGGCTATGATGAAGAATTGAAGAGTGCTATGGAATACGTATTTGGTTCAACCTTTGTTTGCAAAACCATTGATACTGCAAAGGAGGTTGCATTTAATCGGGCAACTCAGACTCCAAGTGTCACTCTTGAAGGAGACATATTCCAACCAAGTGGTCTTCTTACTGGTGGAAGCCGGAAGGGTGGTGGTGATCTTTTAAGGCAACTTCATGCTTTGGCAGAGGCTGAGTCGAAGCTTTCAATACATCAAAGAAGGTTGTCTGAGATTGAAGCACAGATTGAAAAGCTGCTTCCTGTTCAGACAAGATTCAAGGACCTCAAGGCACAATTAGAACTCAAATCATACGATCTTTCATTGTTTCAGGGCAGGGCTGAGCAAAATGAGCATCATAAGCTTGGGGAATTAGTAAAGAAGATAGAGCAAGAGCTTGAAGAAGCAAAATCTTCATTCAAGGAAAAGCAACTTCTGTATGAAAACTGTATCAAGTCAGTTTCAACTCTTGAGAAATCAATCAAAGAACATGACTATAATCGGGAGAGTAGGCTGAAAGAATTGGAGAAAAAAATAAAGTCAATCAAAACTCAGATGCAGTCTTCTTTGAAAGAGCTCAAGGGACATGATAATGAAAAGGAGAGGCTTGTAATGGAAATGAACGCTGTTGTCCAGGAACAAGAATCCTTGGAAAGTCAACTGGCTTCTTTGAGAACACAGATTAATAATCTTGCTTCTGAAGTAGAAGAGCAAAGGTCCAGGGTTGCTGCTGCAAGGGATAACCATGATCAGTGTCAGTCAGAGCTAAAATCAATTCGCCTGAAAATGAAGGAATGTGATAAAGAAATCAGTGATATTGTTAAGGAGCAGAAAAAACTTGAACATAAAATTACTGAGAGTAATCTTGCAAGGAAGAGGATGGAAAATGAGGTAAAAAGAATGGAGATGGAACAAAAAGACTGTTCTCTGAGGGTGGATAAATTAGTAGAGAAGAATGCATGGATTCCATCTGAGAAAAAGTTTTTTGGTAAAAGTGGGACTGATTATGATTTTTCTTCTTATGATCCTTGTAAAGCAAGTGAAGAACTTGAGAAGCTTCGGGCTGAACAATCTGGGCTTGAGAAAAGGGTGAACAAGAAAGTAATGGCAATGTTTGAGAAGGCAGAAGAAGAGTATAATGAACTGATTTCCAAGAAAAACATAATTGAGGCTGACAAGACCAAAATCAAGAATGTGATTGAAGAGCTTGATGAGAAGAAGAAGGCAACATTAAGTGTCACCTGGCACAAAGTTAACAATGACTTTGGGTCCATCTTTTCTACTCTATTACCGGGTGCAACAGCTAAGTTAGAACCTCCTGAAGGATGCAATTTTCTTGATGGTCTTGAGGTTCGCGTTGCATTTGGAGGTGTGTGGAAACAGTCCTTGTCGGAATTGAGTGGAGGTCAACGATCACTCCTTGCACTTTCTCTAATTCTAGCACTACTTCTATTCAAACCTGCTCCACTTTACATCCTAGATGAGGTTGATGCGGCTCTTGACTTAAGCCACACACAAAATATAGGGAGAATGATAAAAGCTCACTTTCCACACTCCCAGTTTATTGTGGTTTCACTAAAGGAAGGCATGTTCAACAATGCAAATGTTCTTTTCCGGACAAAATTTGTTGATGGTGTTTCAACTGTTCAGCGAACTGTTACTAAGCAGAAGTGA 3525 0.4079 MYIKEVCLEGFKSYANRTVVPGFDPFFNAITGLNGSGKSNILDSICFVLGITNLQQVRASNLQELVYKQGQAGITKATVSIAFDNSDRSRSPFGYEDHPEITVTRQIIVGGRNKYLINGKLAQPSQVQNLFHSVQLNVNNPHFLIMQGRITKVLNMKPPEILSMLEEAAGTRMYESKKENALKTLEKKQNKVDDINNLLDREIIPALEKLRKERMQYMQWANGNAELDRLRRFCIAYEYVQAERIRDSAATELEQVKAKMAGIDDNNTKNQAEVEEMEKKVAELTAEKEARMGEEVKSLSDKVDALAQDLVRETSVLNNKEDTLRSEKANEQNIVSNIEDLKQSIEAKASAVKKAEEGAADLKKKVDELSKSQQEHEKEYQGVLAGKSSGNEEKCLEDQLADAKVAVGSAETELKQLKTKISHCEKELKEKSNQLRSKREEAIAVENELNARRKDVENAKMELESLPYKEGEMEALQKEHTSEMEGVQKWKDEIRNLSAQLANVEFTYRDPVKNFDRSKVKGVVAKLIKVKDRSTMTALEVTAGGKLFNVVVDAETTGKQLLQNGDLRRRVTIIPLNKIQPHTVPSRVREAASRIVGKESAELALSLVGYDEELKSAMEYVFGSTFVCKTIDTAKEVAFNRATQTPSVTLEGDIFQPSGLLTGGSRKGGGDLLRQLHALAEAESKLSIHQRRLSEIEAQIEKLLPVQTRFKDLKAQLELKSYDLSLFQGRAEQNEHHKLGELVKKIEQELEEAKSSFKEKQLLYENCIKSVSTLEKSIKEHDYNRESRLKELEKKIKSIKTQMQSSLKELKGHDNEKERLVMEMNAVVQEQESLESQLASLRTQINNLASEVEEQRSRVAAARDNHDQCQSELKSIRLKMKECDKEISDIVKEQKKLEHKITESNLARKRMENEVKRMEMEQKDCSLRVDKLVEKNAWIPSEKKFFGKSGTDYDFSSYDPCKASEELEKLRAEQSGLEKRVNKKVMAMFEKAEEEYNELISKKNIIEADKTKIKNVIEELDEKKKATLSVTWHKVNNDFGSIFSTLLPGATAKLEPPEGCNFLDGLEVRVAFGGVWKQSLSELSGGQRSLLALSLILALLLFKPAPLYILDEVDAALDLSHTQNIGRMIKAHFPHSQFIVVSLKEGMFNNANVLFRTKFVDGVSTVQRTVTKQK 1174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g01418 1174 Coils Coil 736 763 - -
Bach9g01418 1174 FunFam Structural maintenance of chromosomes 2 995 1174 - -
Bach9g01418 1174 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 1157 IPR027417 -
Bach9g01418 1174 Coils Coil 487 507 - -
Bach9g01418 1174 Coils Coil 239 294 - -
Bach9g01418 1174 PIRSF SMC 1 1158 IPR024704 GO:0005524|GO:0016887
Bach9g01418 1174 Coils Coil 982 1026 - -
Bach9g01418 1174 Coils Coil 817 872 - -
Bach9g01418 1174 SMART SMC_hinge_2 518 638 IPR010935 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Bach9g01418 1174 Gene3D - 411 591 - -
Bach9g01418 1174 Coils Coil 338 379 - -
Bach9g01418 1174 CDD ABC_SMC2_euk 1 156 IPR027120 GO:0005524|GO:0016887
Bach9g01418 1174 Gene3D - 592 666 - -
Bach9g01418 1174 FunFam Structural maintenance of chromosomes 2 1 202 - -
Bach9g01418 1174 Gene3D - 995 1174 IPR027417 -
Bach9g01418 1174 Coils Coil 789 809 - -
Bach9g01418 1174 Pfam RecF/RecN/SMC N terminal domain 2 1161 IPR003395 -
Bach9g01418 1174 Gene3D - 802 892 - -
Bach9g01418 1174 SUPERFAMILY Smc hinge domain 478 686 IPR036277 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Bach9g01418 1174 Gene3D - 1 201 IPR027417 -
Bach9g01418 1174 Coils Coil 171 198 - -
Bach9g01418 1174 FunFam Structural maintenance of chromosomes 2 518 582 - -
Bach9g01418 1174 Pfam SMC proteins Flexible Hinge Domain 518 638 IPR010935 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Bach9g01418 1174 Coils Coil 400 466 - -
Bach9g01418 1174 Coils Coil 880 928 - -
Bach9g01418 1174 Coils Coil 679 699 - -
Bach9g01418 1174 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 3 1 1173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g01418 Bach-Chr9 12438464 12447735 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach9g01418 3 170 Structural Maintenance of Chromosomes family AT5G15920 22.619 2.37e-07 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g01418 K06674 - cave:132182958 1897.48