Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g01415 ATGTACATCAAAGAGGTCTGCTTAGAGGGTTTTAAGTCATATGCTAATAGAACTGTTGTCCCGGGGTTTGACCCTTTCTTCAATGCCATTACGGGGTTGAATGGTTCGGGCAAGTCGAACATATTCGATTCGATTTGCTTTGTGTTGGGTATCACGAATTTGCAGCAGGTCCGAGCTTCCAACCTTCAGGAGCTCGTGTATAAGCAAGGACAAGCAGGGATTACAAAGGCCACGGTGTCGATTGCGTTTGATAATTCGGATAGGAGTCGAAGCCCATTTGGATATGAAGATCATCCAGAGATTACAGTCACGAGACAGATTATTGTTGGAGGGAGGAACAAATATTTGATCAATGGGAAACTTGCCCAGCCAAGTCAAGTTCAGAACCTTTTTCATTCGGTGCAGCTTAACGTTAATAACCCACATTTCCTCATAATGCAAGGGCGCATCACCAAGGTTTTAAATATGAAACCACCTGAGATATTATCTATGCTTGAGGAAGCTGCGGGGACGAGAATGTATGAATCTAAGAAAGAGAATGCTCTGAAAACACTTGAGAAGAAGCAGAATAAGGTAGATGATATTAACAACCTTCTTGATCGGGAGATAATACCTGCACTGGAAAAGTTAAGGAAGGAAAGGATGCAGTACATGCAATGGGCAAATGGCAATGCTGAGTTAGACAGGTTGAGAAGGTTTTGTTTTGCTTATGAATATGTGCAAGCGGAGAGGATTAGAGACAGTGCTGCATCTGAGTTAGAAGAAGTAAAGGCCAAGATGGCTGAGATTGATGACAGTAATACGAAGAATCAAGCAGAAGTAGAGGAAATGGAGAAAAAAGTAGCAGAGTTGACCGCAGAAAAGGAAGCACGCATGGGTGGAGAAGTAAAATCTTTGTCGGACAAGGTGGATGCACTTGCCCAGGATCTTGTGAGAGAGACGTCTGTACTAAATAATAAAGAGGACACTCTGAGGAGTGAAAAAGCCAATGAACAAAATATTGTTAGTAATATTGAAGACCTGAAGCAATCTATAGAAGCGAAGGTCTTTGCTGTTAAAAAGGCTGAAGAGGGAGCTGCAGATCTGAAAAAGAAAGTTGATGAGCTTTCTAAGAGCCAGCAGGAGGATGAAAAGGAGTACCAGGGTGTATTAGCTGGAAAGAGCAGTGGAAATGAGGAGAAATGCTTAGAGGATCAGCTGGCTGATGCAAAAGTTGCAGTTGGGAGTGCTGAAACAGAACTGAAACAGTTGAAGACTAAAATTAGCCACTGTGAAAAGGAACTGAAAGAGAAAAGTAATCAATTAAGGTCAAAACGTGAAGAAGCTATTGCTGTAGAAAATGAGCTCAATGCAAGAAGAAAAGATGTTGAAAATGCCAAAATGGAGTTGGAGTCTCTTCCTTACAAAGAGGGCGAGATGGAAGCTTTGCAAAAGGAACATACTTCTGAGATGGAGTGTGTACAAAAGTGGAAGGATGAAATACGCAATCTTTCAGCTCAATTAGCAAATGTTGAATTCACATACCGTGATCCAGTCAAGAGTTTTGACAGGTCAAAAGTGAAGGGTGTGGTTGCAAAACTTATCAAAGTAAAGGATAGATCCACAATGACTGCTCTAGAGGTTACTGCTGGTGGAAAGTTATTTAATGTTGTAGTTGACGCAGAAACTACTGGAAAGCAGCTTCTGCAGAATGGTGATCTAAGAAGAAGAGTAACAATTATACCTTTGAACAAAATACAACCTCATACTGTTCCTTCTAGGGTTCGAGAAGCTGCTTCTAGAATAGTTGGCAAGGAGAATGCTGAACTGGCACTTTCTTTGGTTGGCTATGATGAAGAATTGAAGAGTGCTATGGAATACGTATTTGGTTCAACCTTTGTTTGCAAAACCATTAATGCTGCAAAGGAGGTGACAACTATCCTTGCTGCTGAGGTCGCTGGAACCTTAATTATGGTTGCATTTAATCGGGCAACTCAGACTCCAAGTGTCACTCTTGAAGGAGACATATTCCAACCAAGTGGTCTTCTTACTGGTGGAAGCCGGAAGGGTGGTGGTGATCTTTTAAGGCAACTTCATGCTTTGGCAGAGGCTGAGTCGAAGCTTTCAATACATCAAAGAAGGTTGTCTGAGATTGAAGCACAGATTGAAAAGCTGCTTCCTGTTCAGACAAGATTCAAGGACCTCAAGACACAATTAGAACTCAAATCATACGATCTTTCATTGTTTCAGGGCAGGGCTGAGCAAAATGAGCATCATAAGCTTGGGGAATTAGTAAAGAAGATAGAGCAAGAGCTTGAAGAAGCAAAATCTTCAGTCGAGGAAAAGCAACTTTTGTATGAAAACTGTGTCAAGTCAGTTTCAACTCTTGAGAAATCAATCAAAGAACATGACTATAATCGGGAGAGTAGGCTGAAAGAATTGGAGAAAAAAATAAAGTCAATCAAAACTCAGATGCAGTCTTCTTTGAAAGAGCTCAAGGGATGGAAGGGTGTGTGTGACTTTGGGTCCATCTTTTCTACTCTATTACCCGGTGCAACATCTAAGTTAGAACCTCCTGAAGGATGCAATTTTCTTGATGGTCTTGAGGTTCGCGTTGCATTTGGAGGTGTGTGGAAACAGTCCTTGTCGGAATTGAGTGGAGGTCAACGATCACTCCTTGCACTTTCTCTAATTCTAGCACTACTTCTATTCAAACCTGCTCCACTTTACATCCTAGATGAGGTTGATGCGGCTCTTGACTTAAGCCACACACAGAATATAGGGAGAATGATAAAAGCTCACTTTCCACACTCCCAGTTTATTGTGGTTTCACTAAAGGAAGGCATGTTCAACAATGCAAATGTTCTTTTCCGGACAAAATTTGTTGATGGTGTTTCAACTGTTCAGCGAACTGTTACTAAGCAGAAGTGA 2910 0.4148 MYIKEVCLEGFKSYANRTVVPGFDPFFNAITGLNGSGKSNIFDSICFVLGITNLQQVRASNLQELVYKQGQAGITKATVSIAFDNSDRSRSPFGYEDHPEITVTRQIIVGGRNKYLINGKLAQPSQVQNLFHSVQLNVNNPHFLIMQGRITKVLNMKPPEILSMLEEAAGTRMYESKKENALKTLEKKQNKVDDINNLLDREIIPALEKLRKERMQYMQWANGNAELDRLRRFCFAYEYVQAERIRDSAASELEEVKAKMAEIDDSNTKNQAEVEEMEKKVAELTAEKEARMGGEVKSLSDKVDALAQDLVRETSVLNNKEDTLRSEKANEQNIVSNIEDLKQSIEAKVFAVKKAEEGAADLKKKVDELSKSQQEDEKEYQGVLAGKSSGNEEKCLEDQLADAKVAVGSAETELKQLKTKISHCEKELKEKSNQLRSKREEAIAVENELNARRKDVENAKMELESLPYKEGEMEALQKEHTSEMECVQKWKDEIRNLSAQLANVEFTYRDPVKSFDRSKVKGVVAKLIKVKDRSTMTALEVTAGGKLFNVVVDAETTGKQLLQNGDLRRRVTIIPLNKIQPHTVPSRVREAASRIVGKENAELALSLVGYDEELKSAMEYVFGSTFVCKTINAAKEVTTILAAEVAGTLIMVAFNRATQTPSVTLEGDIFQPSGLLTGGSRKGGGDLLRQLHALAEAESKLSIHQRRLSEIEAQIEKLLPVQTRFKDLKTQLELKSYDLSLFQGRAEQNEHHKLGELVKKIEQELEEAKSSVEEKQLLYENCVKSVSTLEKSIKEHDYNRESRLKELEKKIKSIKTQMQSSLKELKGWKGVCDFGSIFSTLLPGATSKLEPPEGCNFLDGLEVRVAFGGVWKQSLSELSGGQRSLLALSLILALLLFKPAPLYILDEVDAALDLSHTQNIGRMIKAHFPHSQFIVVSLKEGMFNNANVLFRTKFVDGVSTVQRTVTKQK 969
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g01415 969 Coils Coil 487 507 - -
Bach9g01415 969 FunFam Structural maintenance of chromosomes 2 1 202 - -
Bach9g01415 969 Coils Coil 239 287 - -
Bach9g01415 969 Pfam RecF/RecN/SMC N terminal domain 2 956 IPR003395 -
Bach9g01415 969 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 948 IPR027417 -
Bach9g01415 969 SUPERFAMILY Smc hinge domain 485 701 IPR036277 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Bach9g01415 969 Coils Coil 804 824 - -
Bach9g01415 969 Coils Coil 751 778 - -
Bach9g01415 969 SMART SMC_hinge_2 518 638 IPR010935 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Bach9g01415 969 Gene3D - 518 691 - -
Bach9g01415 969 FunFam Structural maintenance of chromosomes 2 518 582 - -
Bach9g01415 969 Coils Coil 171 198 - -
Bach9g01415 969 Coils Coil 352 379 - -
Bach9g01415 969 Gene3D - 577 682 - -
Bach9g01415 969 Pfam SMC proteins Flexible Hinge Domain 518 637 IPR010935 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Bach9g01415 969 Coils Coil 694 714 - -
Bach9g01415 969 PIRSF SMC 832 953 IPR024704 GO:0005524|GO:0016887
Bach9g01415 969 PIRSF SMC 1 830 IPR024704 GO:0005524|GO:0016887
Bach9g01415 969 Coils Coil 400 466 - -
Bach9g01415 969 CDD ABC_SMC2_euk 1 156 IPR027120 GO:0005524|GO:0016887
Bach9g01415 969 Gene3D - 801 969 IPR027417 -
Bach9g01415 969 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 3 1 827 - -
Bach9g01415 969 Gene3D - 1 201 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g01415 Bach-Chr9 12413174 12420872 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach9g01415 3 170 Structural Maintenance of Chromosomes family AT5G15920 22.619 6.03e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g01415 K06674 - gmx:100788674 1301.19