Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bach9g01407 | ATGGAATCCCTCTCCGATGCTAATTCTGTTCATTTATTATTATTTTTTTCAGTTTTGATTGGTGGTAGTTGGGGTTCCTCAGGCACCAAATACCCTGAGACAATGATGGAAGAAGCGGGGGAAAGTGTAGAAAGGCCTATTTTCAGAGACATTAGACGCTATTTCTGTGACTACTGTGGCATCTGCAGGTCCAAGAAAGCCCTGATAACCTCCCACATCAATACTCACCACAAGGAGGAGGTGGAAAAAGCAAAAATTGATAAGGGTCATGAAGCAGAGGGTATAAAATCCAACACTTGCAAGGAATGCGGTGCTATTTTCAAAAAACCTGCCTACTTGATACAACATATGCAAAGCCACTCACTTGAGGGAGGGAGACCTCCTGTGAAGCTCCATCAGGGGTGCCTCGATCACGCTCTTCAATATGAGAGGCCATATGTGTGTACGCTTGATGATTGTCATGCAAGTTACAGAAGGAAGGACCACTTGACTCGTCACCTTCTGCAGCATCAGGGGAAAACTTTCAAATGTCTAATTGAGAATTGCAACCGTGACTTTACTTTCCAGGGGAATATGACAAGGCATGTCAAGGAATTTCATGATGAGAATTCTGCCTCCGCTGATTTTGGAAGTGAGAAGAAGTATGTTTGCCCGGAAATTGGTTGTGGGAAGTTTTTCAAATTTGCGTCAAAGCTAAAAAAGCATGAAAATTCTCATGTTAAGCTGGAATCAGTGGCGGCACTCTGCGTAGAACCTGGTTGTTTGAAGCATTTCACCAATGTCCAGTGCCTTAAAGCTCATATCAAATCCTGCCATCAATACGTGACCTGTGAGATTTGTGAGAGTAAGCAACTAAAGAAGAACATTAAGCGGCACTTACGAGTGCACGAAACTAAAAGTTCACCAGTGACATTTACATGCGAATACAAAAGTTGCAGCAGGACATTCTCAAGTGTAAGACTTTCTTTTCCTTAA | 975 | 0.4267 | MESLSDANSVHLLLFFSVLIGGSWGSSGTKYPETMMEEAGESVERPIFRDIRRYFCDYCGICRSKKALITSHINTHHKEEVEKAKIDKGHEAEGIKSNTCKECGAIFKKPAYLIQHMQSHSLEGGRPPVKLHQGCLDHALQYERPYVCTLDDCHASYRRKDHLTRHLLQHQGKTFKCLIENCNRDFTFQGNMTRHVKEFHDENSASADFGSEKKYVCPEIGCGKFFKFASKLKKHENSHVKLESVAALCVEPGCLKHFTNVQCLKAHIKSCHQYVTCEICESKQLKKNIKRHLRVHETKSSPVTFTCEYKSCSRTFSSVRLSFP | 324 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bach9g01407 | 324 | Pfam | Zinc finger, C2H2 type | 215 | 239 | IPR013087 | - | |
| Bach9g01407 | 324 | Pfam | Zinc finger, C2H2 type | 146 | 170 | IPR013087 | - | |
| Bach9g01407 | 324 | Pfam | Zinc finger, C2H2 type | 99 | 120 | IPR013087 | - | |
| Bach9g01407 | 324 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 177 | 200 | IPR013087 | - | |
| Bach9g01407 | 324 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 217 | 239 | IPR013087 | - | |
| Bach9g01407 | 324 | Gene3D | Classic Zinc Finger | 171 | 208 | - | - | |
| Bach9g01407 | 324 | SMART | c2h2final6 | 275 | 296 | IPR013087 | - | |
| Bach9g01407 | 324 | SMART | c2h2final6 | 54 | 76 | IPR013087 | - | |
| Bach9g01407 | 324 | SMART | c2h2final6 | 175 | 200 | IPR013087 | - | |
| Bach9g01407 | 324 | SMART | c2h2final6 | 98 | 120 | IPR013087 | - | |
| Bach9g01407 | 324 | SMART | c2h2final6 | 146 | 170 | IPR013087 | - | |
| Bach9g01407 | 324 | SMART | c2h2final6 | 215 | 239 | IPR013087 | - | |
| Bach9g01407 | 324 | SMART | c2h2final6 | 247 | 272 | IPR013087 | - | |
| Bach9g01407 | 324 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 98 | 125 | IPR013087 | - | |
| Bach9g01407 | 324 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 54 | 81 | IPR013087 | - | |
| Bach9g01407 | 324 | SUPERFAMILY | beta-beta-alpha zinc fingers | 143 | 172 | IPR036236 | - | |
| Bach9g01407 | 324 | SUPERFAMILY | beta-beta-alpha zinc fingers | 173 | 201 | IPR036236 | - | |
| Bach9g01407 | 324 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 148 | 170 | IPR013087 | - | |
| Bach9g01407 | 324 | Gene3D | Classic Zinc Finger | 36 | 127 | - | - | |
| Bach9g01407 | 324 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 100 | 120 | IPR013087 | - | |
| Bach9g01407 | 324 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 146 | 175 | IPR013087 | - | |
| Bach9g01407 | 324 | SUPERFAMILY | beta-beta-alpha zinc fingers | 52 | 120 | IPR036236 | - | |
| Bach9g01407 | 324 | SUPERFAMILY | beta-beta-alpha zinc fingers | 211 | 241 | IPR036236 | - | |
| Bach9g01407 | 324 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 175 | 205 | IPR013087 | - | |
| Bach9g01407 | 324 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 215 | 244 | IPR013087 | - | |
| Bach9g01407 | 324 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 249 | 272 | IPR013087 | - | |
| Bach9g01407 | 324 | PANTHER | ZINC FINGER PROTEIN | 29 | 318 | - | - | |
| Bach9g01407 | 324 | Gene3D | Classic Zinc Finger | 209 | 240 | - | - | |
| Bach9g01407 | 324 | Gene3D | Classic Zinc Finger | 138 | 170 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Bach9g01407 | Bach-Chr9 | 12350460 | 12352537 | Dispersed/Proximal |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Bach9g01407 | 142 | 317 | C2H2 Transcription Factor Family | AT1G72050 | 47.368 | 2.49e-65 | 207 |
Transcription factors information
| Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
|---|---|---|---|---|---|---|---|
| TF | C2H2 | Bach9g01407 | zf-C2H2 | 0.0016 | CL0361 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bach9g01407 | K09191 | - | qsa:O6P43_029707 | 410.223 |