Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g01405 ATGCACGAGGCAGTATGTTCTGGCTTTGATGGATTAGTATCAGGGAGGGACACCTCCTGTGAAGCTCCATCAGGGAGGCCATATGTGTGTACGGTTGATGATTGTCATGCGAGTTACAGAAGGAAGGACCACTTGACTCGTCACCTTCTGCAGCATCAGGGGAAAACTTTCAAATGTCCAATTGAGGATTGCAACCATGACTTTGCTTTCCAGGGGAATATGACAAGGCATGTCAAGGAATTTCATGATGAGAATTCTGCCTCCGCTGATTTTGGAAGTGAGAAGCATTCACCTGTGACATTTACATGCGAATACAAAGGTTGCAGCCGGACATTCTCAAGTAAATCTAATCTCCGTAAGCACGTGAAGGCTGTACACTTTGAAGAAAAGCCTTTCGGGGATTTTGAAGAAGCTGATGAGCAATATAGGTCAAGGCCAAGAGGAGGCAGGAAGAGAAAGTGCCCACCAGTTGAAATGCTGATTAGGAAGAGAGTTACTACTCCCGGTCAATTGGAGCATCGGTTACTTGCAGAGGAGATTGAGTAG 546 0.4597 MHEAVCSGFDGLVSGRDTSCEAPSGRPYVCTVDDCHASYRRKDHLTRHLLQHQGKTFKCPIEDCNHDFAFQGNMTRHVKEFHDENSASADFGSEKHSPVTFTCEYKGCSRTFSSKSNLRKHVKAVHFEEKPFGDFEEADEQYRSRPRGGRKRKCPPVEMLIRKRVTTPGQLEHRLLAEEIE 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g01405 181 SUPERFAMILY beta-beta-alpha zinc fingers 100 132 IPR036236 -
Bach9g01405 181 SUPERFAMILY beta-beta-alpha zinc fingers 55 83 IPR036236 -
Bach9g01405 181 ProSiteProfiles Zinc finger C2H2 type domain profile. 57 87 IPR013087 -
Bach9g01405 181 ProSiteProfiles Zinc finger C2H2 type domain profile. 28 57 IPR013087 -
Bach9g01405 181 Gene3D Classic Zinc Finger 53 96 - -
Bach9g01405 181 Gene3D Classic Zinc Finger 97 144 - -
Bach9g01405 181 ProSitePatterns Zinc finger C2H2 type domain signature. 103 126 IPR013087 -
Bach9g01405 181 ProSitePatterns Zinc finger C2H2 type domain signature. 59 82 IPR013087 -
Bach9g01405 181 Gene3D Classic Zinc Finger 20 52 - -
Bach9g01405 181 SMART c2h2final6 28 52 IPR013087 -
Bach9g01405 181 SMART c2h2final6 101 126 IPR013087 -
Bach9g01405 181 SMART c2h2final6 57 82 IPR013087 -
Bach9g01405 181 SUPERFAMILY beta-beta-alpha zinc fingers 25 54 IPR036236 -
Bach9g01405 181 Pfam Zinc finger, C2H2 type 57 82 IPR013087 -
Bach9g01405 181 Pfam Zinc finger, C2H2 type 28 52 IPR013087 -
Bach9g01405 181 PANTHER ZINC FINGER PROTEIN 97 170 - -
Bach9g01405 181 ProSiteProfiles Zinc finger C2H2 type domain profile. 101 131 IPR013087 -
Bach9g01405 181 ProSitePatterns Zinc finger C2H2 type domain signature. 30 52 IPR013087 -
Bach9g01405 181 Pfam C2H2-type zinc finger 101 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g01405 Bach-Chr9 12331157 12332583 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach9g01405 26 90 C2H2 Transcription Factor Family AT1G72050 58.462 1.35e-21 87.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bach9g01405 zf-C2H2 0.0064 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g01405 K09191 - pvy:116140489 137.117