Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g01386 ATGGCCGCTCTTAAGCCATTCTCTTTCCCAAAATTGCTTAGTTATTTTCTGGTTTTTCTTTTCTACTTGGAGGACAGGTTCTGTCTAGGCTTCAACCCCAAACTGCTAAACTTGTCTCTGGTGGCAGCCCATTGGTCCTCGGCCGGAGCCACCTGGTACGGCAGCCCTCACGGTGCTGGAAGCGACGGAGGGTCTTGTGGGTATGGAAATACAGTGTCGCAGCCACCATTCTCCTCCATGGTTACAGGAATAGGCCCTTCTCTCTACCAATCAGGCAAAGAATGTGGAGCCTGTTATCAGGTAAAATGCACAAAGCATAAATCATGTTCCGGAAAACCAGTTAGGGTGGTAATAACAGATTTTTGCCCTGGATGTCCAACTTCGTACGGATCTGCGCATTTTGATCTCAGTGGAACTGCATTTGGTGCCATGGCAATTCCTGGCCAAGAAGATAAACTTCGCAATGCCGGCGTTCTGCAAATTCGCTATGCCCGCGTTGGATGTGATTACTCAGGAAAGACTCTTATATTTCGAGTTGATCCGGGCTCAAACCCTAGCTACATCGCTGTGTTGGTAGAGTATGAAGAGGGGGATGGTGATCTAGCAGGTGTTTCGCTCATGGAGGCCTCGAAGGAGAGGCTAGGGTGGCGTGCCATGCAGCAGTCATGGGGTGCGGTATGGAAGCTTGATGCAGGCTCGGTGCTAAAAGCTCCAATCACTATAAAGCTAACCTCTCGATATTCAGGAAAAACCCTAGTTGCAAAGAATGTGATTCCAAAGGGATGGAAGCCTGGTTCAACTTATAGATCCTTGGTTAACCACCTCTGA 828 0.4879 MAALKPFSFPKLLSYFLVFLFYLEDRFCLGFNPKLLNLSLVAAHWSSAGATWYGSPHGAGSDGGSCGYGNTVSQPPFSSMVTGIGPSLYQSGKECGACYQVKCTKHKSCSGKPVRVVITDFCPGCPTSYGSAHFDLSGTAFGAMAIPGQEDKLRNAGVLQIRYARVGCDYSGKTLIFRVDPGSNPSYIAVLVEYEEGDGDLAGVSLMEASKERLGWRAMQQSWGAVWKLDAGSVLKAPITIKLTSRYSGKTLVAKNVIPKGWKPGSTYRSLVNHL 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g01386 275 Gene3D - 35 169 IPR036908 -
Bach9g01386 275 CDD DPBB_EXPB_N 45 168 - -
Bach9g01386 275 SUPERFAMILY PHL pollen allergen 174 270 IPR036749 -
Bach9g01386 275 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 63 173 IPR007112 -
Bach9g01386 275 Pfam Expansin C-terminal domain 177 259 IPR007117 -
Bach9g01386 275 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 186 270 IPR007117 -
Bach9g01386 275 SMART dpbb_1 81 163 IPR007112 -
Bach9g01386 275 PRINTS Major pollen allergen Lol pI signature 193 208 IPR005795 GO:0005576|GO:0019953
Bach9g01386 275 PRINTS Major pollen allergen Lol pI signature 103 113 IPR005795 GO:0005576|GO:0019953
Bach9g01386 275 PRINTS Major pollen allergen Lol pI signature 225 242 IPR005795 GO:0005576|GO:0019953
Bach9g01386 275 PRINTS Major pollen allergen Lol pI signature 177 192 IPR005795 GO:0005576|GO:0019953
Bach9g01386 275 PANTHER EXPANSIN-B3 32 273 - -
Bach9g01386 275 SUPERFAMILY Barwin-like endoglucanases 37 172 IPR036908 -
Bach9g01386 275 Pfam Lytic transglycolase 86 163 IPR009009 -
Bach9g01386 275 Gene3D - 170 274 IPR036749 -
Bach9g01386 275 PRINTS Expansin/Lol pI family signature 85 103 IPR007118 GO:0005576
Bach9g01386 275 PRINTS Expansin/Lol pI family signature 216 230 IPR007118 GO:0005576
Bach9g01386 275 PRINTS Expansin/Lol pI family signature 62 80 IPR007118 GO:0005576
Bach9g01386 275 PRINTS Expansin/Lol pI family signature 44 59 IPR007118 GO:0005576
Bach9g01386 275 PRINTS Expansin/Lol pI family signature 156 172 IPR007118 GO:0005576
Bach9g01386 275 PRINTS Expansin/Lol pI family signature 256 270 IPR007118 GO:0005576
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g01386 Bach-Chr9 11851771 11854388 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach9g01386 31 273 Expansin Gene Family AT1G65680 58.943 1.77e-100 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g01386 - - zju:107414171 407.912