Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g01374 ATGGTAGAAATCTTGAGTAGAATCCGTCATCCAAATTTACTTGTCCTTCTTGGTGTATGTCCTGATCATGGATGCCTTGTGTATGAATATATGGAAAATGGTAGCTTGGATGACAGGTTACTCCGAAAGAATAGTACACCCCCAATTCCTTGGTTTGACAGGTACCGAATTGCTTGGGAAGTAGCCTCAGCTCTTGCCTTTCTTCACAACTCAAAGCCCATGCCCATCATCCATCGTGATTTGAAACCGGCAAACATCTTGCTTGATCGTAACCTTGTGAGCAAGATTGGTGATGTTGGCCTTTCTACAATGCTTGATTCAGAAACCTCATCTACCATGTACAAGGACACAGGACCTGTTGGGACACTCTGCTACATAGATCCTGAGTACCAAAGGACTGGATCAATATCTCCAAAATCTGATATTTATGCTTTTGGAATGGTGATCTTACAGTTATTGACAGCAAAACCCGCAATAGCACTCACACACGTGGTTGAAACAGCAGTTGAGGATGGAAATTTAACAGATATATTGGATCCAGAGGCAGGGAATTGGCCATTTCCGGAGACACTGGACTTAGCTCGGTTGGGACTGAGCTGTGCAGAGCTTCGACGTATAGACAGGCCAGATTTGAAAGATCATGTCATTCCTACCCTGGAGAGATTGAAAGAAGTTGCTGATAGAGCAAAAGATTCTTCTTCTGTTTTAGCTGCAGCTTCTGCTTCAAGTGCTAAATCCAGACCTCCTAATCACTTTATCTGCCCAATACTTCAGGATGTTATGGAAGATCCTTGTGTTGCTGCCGATGGATACACATATGATCGTAAAGCAATTGAAATATGGTTTCTAGAAAATGACAAATCTCCGATGACAAATATGACACTGCCTCATAAGACCCTAATTCCTAATTACACACTTCTATCAGCAATCTTGGAGTGGAAGTCAAGAGGAAAGTGATATCAACATTATTCATTGCCAATGTTGATGTTTACTACCCACGTGTCATTAGCTACCCACTCTAAAAGTAGAGATGCAGATCCTCTGATTTTAAAATTCACAGCAGTATGAGAGCGATAAATGCAGAAAAAAGTAAGACCCAAAAAGTAACTGTTTTGCCACTATCAAAATGAGACCTAGGCTATAGGCTCAAGCTGCCAGTGGCAAAATAGTTCATTTCTGAGCAACAAAATAGTTCATGTTATAAGTGGGTAGTTTTTTTTTTTTTTTCTCCCTGGAAATATTTGGCTTCTTTAGTGTAGCTTTGCTCAAAAGTTCAGTGTACAATGAGCAGTAGTATCAGAGATGCAGTTTTTGTCTGTCTACCATCATGCAATGCTGTTTGGTTAAAATAGGGAGATTGATTCTTGAATGTAAATACATTTGATTCTACTGTTGGATGCAGCATACACTGTAATTGAAATGTGAAGGGTTA 1432 0.4022 MVEILSRIRHPNLLVLLGVCPDHGCLVYEYMENGSLDDRLLRKNSTPPIPWFDRYRIAWEVASALAFLHNSKPMPIIHRDLKPANILLDRNLVSKIGDVGLSTMLDSETSSTMYKDTGPVGTLCYIDPEYQRTGSISPKSDIYAFGMVILQLLTAKPAIALTHVVETAVEDGNLTDILDPEAGNWPFPETLDLARLGLSCAELRRIDRPDLKDHVIPTLERLKEVADRAKDSSSVLAAASASSAKSRPPNHFICPILQDVMEDPCVAADGYTYDRKAIEIWFLENDKSPMTNMTLPHKTLIPNYTLLSAILEWKSRGK 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g01374 318 ProSiteProfiles U-box domain profile. 247 318 IPR003613 GO:0004842|GO:0016567
Bach9g01374 318 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 247 318 IPR013083 -
Bach9g01374 318 CDD RING-Ubox_WDSUB1-like 249 303 - -
Bach9g01374 318 PANTHER OS02G0152300 PROTEIN 2 312 - -
Bach9g01374 318 Pfam Protein kinase domain 2 191 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach9g01374 318 ProSiteProfiles Protein kinase domain profile. 1 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach9g01374 318 Gene3D Transferase(Phosphotransferase) domain 1 35 244 - -
Bach9g01374 318 SMART Ubox_2 251 313 IPR003613 GO:0004842|GO:0016567
Bach9g01374 318 SUPERFAMILY Protein kinase-like (PK-like) 2 213 IPR011009 -
Bach9g01374 318 ProSitePatterns Serine/Threonine protein kinases active-site signature. 76 88 IPR008271 GO:0004672|GO:0006468
Bach9g01374 318 Gene3D Phosphorylase Kinase; domain 1 1 34 - -
Bach9g01374 318 SMART serkin_6 2 217 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach9g01374 318 SUPERFAMILY RING/U-box 240 316 - -
Bach9g01374 318 Pfam U-box domain 249 315 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g01374 Bach-Chr9 11677598 11679850 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach9g01374 2 318 U-box Gene Family AT5G51270 63.889 4.04e-151 442
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Bach9g01374 Pkinase 6.6e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g01374 - - gmx:100801699 525.783