Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g01342 ATGAAACGGTCTCCTCCTCTCCCTCCTTCTTCTTCTACTTCATCATCAGCAACTTCCTCTGTTGTTGAAAATCTTCATCAACCAAGCCAAACAAGGCCAAAACGTGTGAGAAGGAATCTGAAGCCTGAGAAATCTGTGAACAAGGGAGCTCATAATAACTCAAGCTCCAGCAGAAGAAGCTCCATTTACAGAGGAGTCACCAGGCATAGATGGACAGGGAGATATGAAGCTCACCTCTGGGACAGAACCAGCTGGAACAAATTTCAAAACAAGAAAGGAAAACAAGGTGCATATGATAGTGAAGAGGCTGCAGCTCGTACCTATGATCTTGCTGCTCTCAAGTATTGGGGGCAGGACACAAACTTGAATTTCCCAAAGGAAATATATATCAAGGAGCTTGAGGAAATGGAGAAGGTGTCAAAAGAAGAATACTTGGCTTATTTAAGGAGACGAAGTAGTGGGTTTTCTCGAGGGGCTTCCAAGTATCGCGGAGTGGCTAGGCATCACCATAACGGTCGATGGGAGGCAAGGATTGGAAGAGTATACGGGAACAAGTATCTCTATTTGGGTACCTTCAGTACTCAAGAAGAAGCTGCAGCAGCATATGACATGGCAGCTATACAGTACAGAGGAGTAAAAGCAGTGACCAATTTTGACATCAGCAACTACATTGATATTATAACGAAGAAAAGCTTGGAACCTCCACAAGAAAAACAAACCCAAAAAGCCCGTAAGATTCCCATAATAAAGAAGAGAAAAATGGACCAAAACCAAACCCAAGAAACACAACCAGATCCCAAAACAAAGAATTTAAGCTACAAAACTCAGGAAACAGAGACCCAGGATTCACAAACAGTTCCAAACATATCCTCCTCTGAATTGGAAGCAGAAAAACCACAACTTGAATTTCATTTCCAGTCACCCAAAACAGAGTCTACCCGGATTCCTCTCTCTGTGGAATCTTCATCAATGGCTGTGATGGAGCATGTGATAGAGCAAGAGCTTGACTGGAGCTTTACGGATTCTGTGTTTTCTCAATTTCAAGACTCAGAGCTGCCTCTAGCAAAATCAGAGTCTTTTCTGAGTATGCTAGATGATGCAAGGTTTGAGGAGGACATTGATTTTCTATTCCAAGGAGAAAACGATTTCAGTTTAAACGCAATCTTGGAAAATCCAAGTTTTGGAGACATTTCTGGTGCAGCAACAAGAATGGTGGATAATGGGCAGGAAAAATTGTCCTGTGTTTCTTCTTCTGCTGCTTCAGCTTCTTCACCTTCTTCAACAACTTCAATTTCTTGTAACTATTCTCTATGA 1314 0.4209 MKRSPPLPPSSSTSSSATSSVVENLHQPSQTRPKRVRRNLKPEKSVNKGAHNNSSSSRRSSIYRGVTRHRWTGRYEAHLWDRTSWNKFQNKKGKQGAYDSEEAAARTYDLAALKYWGQDTNLNFPKEIYIKELEEMEKVSKEEYLAYLRRRSSGFSRGASKYRGVARHHHNGRWEARIGRVYGNKYLYLGTFSTQEEAAAAYDMAAIQYRGVKAVTNFDISNYIDIITKKSLEPPQEKQTQKARKIPIIKKRKMDQNQTQETQPDPKTKNLSYKTQETETQDSQTVPNISSSELEAEKPQLEFHFQSPKTESTRIPLSVESSSMAVMEHVIEQELDWSFTDSVFSQFQDSELPLAKSESFLSMLDDARFEEDIDFLFQGENDFSLNAILENPSFGDISGAATRMVDNGQEKLSCVSSSAASASSPSSTTSISCNYSL 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g01342 437 MobiDBLite consensus disorder prediction 259 288 - -
Bach9g01342 437 SUPERFAMILY DNA-binding domain 61 126 IPR016177 GO:0003677
Bach9g01342 437 CDD AP2 160 221 IPR001471 GO:0003700|GO:0006355
Bach9g01342 437 CDD AP2 62 125 IPR001471 GO:0003700|GO:0006355
Bach9g01342 437 SMART rav1_2 161 225 IPR001471 GO:0003700|GO:0006355
Bach9g01342 437 SMART rav1_2 62 131 IPR001471 GO:0003700|GO:0006355
Bach9g01342 437 MobiDBLite consensus disorder prediction 1 61 - -
Bach9g01342 437 MobiDBLite consensus disorder prediction 1 29 - -
Bach9g01342 437 MobiDBLite consensus disorder prediction 234 258 - -
Bach9g01342 437 MobiDBLite consensus disorder prediction 234 288 - -
Bach9g01342 437 Pfam AP2 domain 62 117 IPR001471 GO:0003700|GO:0006355
Bach9g01342 437 Pfam AP2 domain 160 211 IPR001471 GO:0003700|GO:0006355
Bach9g01342 437 Gene3D AP2/ERF domain 160 221 IPR036955 GO:0003700|GO:0006355
Bach9g01342 437 Gene3D AP2/ERF domain 62 127 IPR036955 GO:0003700|GO:0006355
Bach9g01342 437 FunFam AP2-like ethylene-responsive transcription factor 160 221 - -
Bach9g01342 437 ProSiteProfiles AP2/ERF domain profile. 161 219 IPR001471 GO:0003700|GO:0006355
Bach9g01342 437 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 20 303 - -
Bach9g01342 437 FunFam AP2-like ethylene-responsive transcription factor 61 127 - -
Bach9g01342 437 PRINTS Ethylene responsive element binding protein signature 63 74 IPR001471 GO:0003700|GO:0006355
Bach9g01342 437 PRINTS Ethylene responsive element binding protein signature 201 221 IPR001471 GO:0003700|GO:0006355
Bach9g01342 437 ProSiteProfiles AP2/ERF domain profile. 62 125 IPR001471 GO:0003700|GO:0006355
Bach9g01342 437 MobiDBLite consensus disorder prediction 46 61 - -
Bach9g01342 437 SUPERFAMILY DNA-binding domain 160 221 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g01342 Bach-Chr9 11157221 11161450 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach9g01342 52 235 AP2-EREBP Transcription Factor Family AT5G57390 64.706 2.07e-79 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Bach9g01342 AP2 4e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g01342 - - gmx:100789774 367.081