Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g01307 ATGGCAGATCCTTGTCCCTCTGAGGCCTCTAGCATATCAGCTACCTCCGAAGGAAATTCGAGTAAAGATGGCGTTCTGAACCAGAAGATGAGGGCGAAAGAGAACGAGAAAGCTGACGATTCTGAACTTGATCAGGCATCTAGGTCAAGCCCTCGTGTTTTGCTGGACTTGATGAAGATTTCCAGTGATGATTCTGCTCATGGGTCGAAGGTGGAACATGATTTTTTGAATTCTGGGACTTTTGCATCGTCTTCTAGGACAAACAATGAAGAGATAGATGAGAACACGCGCGAGAAGACGTCGGAGCCGAGAGTTTTCTCTTGTAATTTCTGCAAGAGAGAGTTCTCTTCGTCCCAGGCTTTGGGAGGGCACCAGAACGCCCATAAGCAAGAAAGGGCGCTGGCCAAAAGGCGTCAAGGGATTGATGTTGGTCCTTATGGACATCCTTACTTACCTTATTACACTTATCCAAGCCTCTCGACTCAACCTATTTATGGATCATACAATAGGGCACTAGGGGTAAGAGTGGAATCAATGATTCATAAGCCTCCCTATGCTTGGACCTCACCAGGCTATAAGTTTGGCCATGGTGCTGGGTGGTCAAGGCAAACTATGGTCAACTCACCAACCGTTAATAGCCTGAGGATAGATGATTTGCAAGCACATGGTGATGGTGGTGGTGGTGGACTTCTCGGCAGCTCTTCTAGTTCAAGGCTAGAGGAAGTTGGCGGCTCTCTCCGCCACTTGGGTGAGCCTTCTTCGGGTGTTGCTGCTACTAATTCAAGCCCTGGCTTGAACGTGCCAGCTTTAACTGCAAGTGGAGAAGAACCCTCCAAAGCCAATGATCCTGAATCTTCTGAGCTTGATTTATCACTTAAGCTTTAG 885 0.478 MADPCPSEASSISATSEGNSSKDGVLNQKMRAKENEKADDSELDQASRSSPRVLLDLMKISSDDSAHGSKVEHDFLNSGTFASSSRTNNEEIDENTREKTSEPRVFSCNFCKREFSSSQALGGHQNAHKQERALAKRRQGIDVGPYGHPYLPYYTYPSLSTQPIYGSYNRALGVRVESMIHKPPYAWTSPGYKFGHGAGWSRQTMVNSPTVNSLRIDDLQAHGDGGGGGLLGSSSSSRLEEVGGSLRHLGEPSSGVAATNSSPGLNVPALTASGEEPSKANDPESSELDLSLKL 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g01307 294 ProSitePatterns Zinc finger C2H2 type domain signature. 108 128 IPR013087 -
Bach9g01307 294 Gene3D Classic Zinc Finger 82 142 - -
Bach9g01307 294 MobiDBLite consensus disorder prediction 8 26 - -
Bach9g01307 294 MobiDBLite consensus disorder prediction 254 268 - -
Bach9g01307 294 Pfam C2H2-type zinc finger 105 130 - -
Bach9g01307 294 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 1 294 IPR044246 GO:0009788
Bach9g01307 294 ProSiteProfiles Zinc finger C2H2 type domain profile. 106 133 IPR013087 -
Bach9g01307 294 MobiDBLite consensus disorder prediction 1 51 - -
Bach9g01307 294 MobiDBLite consensus disorder prediction 218 294 - -
Bach9g01307 294 SUPERFAMILY beta-beta-alpha zinc fingers 103 133 IPR036236 -
Bach9g01307 294 MobiDBLite consensus disorder prediction 27 46 - -
Bach9g01307 294 MobiDBLite consensus disorder prediction 280 294 - -
Bach9g01307 294 MobiDBLite consensus disorder prediction 64 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g01307 Bach-Chr9 10664499 10665383 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach9g01307 100 214 C2H2 Transcription Factor Family AT5G10970 44.444 1.85e-24 97.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bach9g01307 zf-C2H2_6 1.4e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g01307 - - gmx:102663393 238.424