Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g01216 ATGGAGAACCAGGCTCGGGTTCTGTGCTCAGAGAACCAAGAGCTCGCAGTGTACATGTGGAACAAGTGGAAAGAAATGGCAGAGAAGCCGAAAGGGATCTCAGAGAACATTGAAAAGACTCTGTCTAAAGCTTACCATAATATCTGTAACTCTAAAACGCCAATTCAAACCATGAAGGACTTCTCTCAGGTCAAGGGAGTAGGGAAATGGATTTTGAGGCTCATGCAAGGGTTCTTCGAGCCCGGTTCAGGAGGTTCTGAACCAGTAGATTTGAGCAAAAAGGGGAAGAAAACTAAAGGAAGCAATCGCTACGTACCTCAAAAGAATTCTGTGGCATATGCATTATTGATTGCCCTTTACAGGGGAACTTCAAACGGGAATGAATTTATGCGTAAACAGGAACTTATTGATGCTGCAGAAGCTAGTGGGCTATCTCGAGCACCAATTGTGCCAGAAAAGGGAAAAGGAAAACCTGGACAGTTTGGAAGTTCTTCAAGGGAATGGTACAGTGGATGGAGCTGCATGAAGACACTGATAACGAAGGGATTAGTTGTAAAATCAAGTTGTCCAGCAAAGTACATGCTAACTCAAGAAGGTAAAGAGACAGCACGTGAATGTCTGACAAGATCTGGAATGGCAAATCCAGAAGAGAACTTGGTTACTGTAGAAAGCCTTTCTGATGTGGAGGAGCAAAATACATCAAATATGGAATTCAGGGGTGATGATTTGGAAGTAGAAGTAACATCACCATTGGCCCAGAAAAAGAAGCTAATGGATGTTCCTCTTGATTCCCTTGAGAGGTTTACACACATGGGCTACTCCAAGGAACAAGTTATTTGTGCTTTCTCTGAGGTTTCTAAAAGTTATCCAGATAAGGATGTTTCATTGCTCTGGCCATCAGTTTTATGTCATCTTCGAGAGGAGCAAGTCTATGGTTTACAGTCGGGATCTCAAAATATGAGAAATAATTGCCAGATGAGAAGTACTCGTACAGTTGCAAATGATCGTATTGGAACGGAGACCAGGCCTGTGAATTTGTCCTGTAGTGCACATATGCCAAATCGTGATGCTACAGAATTTTCCTTGAGAGCTTGCTCATCATCTGACTATGCCATGCATAAGTCAATCAAAGATGGACCTGAACTAAAGATGAACGTTTTAAGTGTGCCACCATTGAGCTTAGGGGAGAGATTTGAGGATGCATATGAAGTCATTTTAATACTGGATGATCGGGAGCAATTTGCCACTCAGGGATCACGATCTAGGAGAATTATTGAGAACATCTGCAGTCAATTCAAAATTCAAATAGAGGTTAGGCGACTGCCAGTTGGAGATGGAATTTGGATAGCTCGCCATAAAACTCTTGACAGTGAATACATACTGGATTTTATAGTTGAAAGAAAGAACATTGGTGATTTACGCTGTTCAATCCGGGATAACCGCTACAAGGATCAAAAATTAAGGCTTCTGAGGTGTGGACTGAAGAAGCTGATATATCTTGTGGAAGGTGATCCTAATTCTTCTGAAGCTGCTGAAAGCATAAAAACTGCCTGTTTCACAACAGAGATTCTGGAGGGATTTGATGTGCAGAGAACAAGTGGCTTATCTGATACACTAAAGAAGTATGGTTATCTTACCCAGGCAATTTCGCAATACTACAAATCAAGAGATTTGGATGAAGATATTAAGTTCTCCAAGATATGCCCTCCTTTTGATGAATTTATCAGAAGGTGCCAAGACCTTGATAAAATGACAGTCAGTGATGTATTTGCTACCCAACTTATGCAGGTCCCACAGGTTACAGAGGAGATTGCCATGGCTGTGCTGGATTTGTACCCTACTCTTCACTCTCTTGCCCATGCCTACTTTCTTCTTGAGAGTGATGTCTCTGCACAACAAGACATGCTTAGAAGACAGAGTAACAATGTGATCAATGCAGTGGCAAGTAGGAACATTTTCCAATGTGAAGAATTTGAAGTTGGTGGTCTACCTGATCAGTTATCAAACCAGCAAGCTATGGAATTTGGATTAGGTTCACCATACAATCCATGCTTAGGTTCACCATATCAGTGGCTTAGAGAGCAGAGATGGGACAACAATAGGGGCTTAAATCTGATTCGTCTTCTTCGTGAGTGTGCTCACTGTGTGGCATGTGGCAGCATCAAGAATGCAGATATTGGACTTGAATATATTTCTCAGCTGGCCTCTCCTGATGGTGATTCTGTGCAGAGAATGGCTACTTATTTCAGTGAAGCACTTGCTTACAAAATAGTTAAAAATTTGCCTGGTGTATATAAAGCCCTCAATTCTTCAAAAGCATCATCAATCTCAGAAGAACCTTTTGTCCAGAATTGTTTCTTCAAGTCATGCCCTTTCTTGAAGATTGCCTACTTGGTCACCAACCAAGCTATTGTTGAAGCCATGGAAGGGGAGAAAATGGTTCACATTATAGATCTCCATTCTTCTGAACCTGCTCAGTGGGTTGATCTTCTGCAGACTTTGAAGAAACGTAGAGAAGGCCCACCACATCTGAAGATCACAGGCATTCATGAGAACAAACAGGTTTTAGATCAAATGAACTTTCTCTTGACAAGGGAAGCTGAGAAATTGGACTTCCCTTTACAATTCAATGCTCTTGTGAGCAAGCTTGAAGATCTTGACATTGAAAGATTGCCTGTTAAGACAGGAGAAGCTCTTGCAATCAGTTCTGTGCTCCAGCTGCATTCTCTTCTTGCAACAGATGATGAAATGCTTGGCAGAAACTCACCTGCACCTTCAATGAATCTTCATAGAGCAGTTCACATGAACCAGATGACTTTCGCGGAGTGGCTCGAGCAGAAAGATATGATCAATGCTTTTCTGAGTCCAGATTCTTCATTGTCACCTCTTTCACTAGGTTCTTCACCTAAGATGGGAATCTTTCTGAATGCTCTGAGGAAATTCCAACCAAAAATAATGGTGATTACTGAACAAGAATCAAACCTTAATGGGCCTAATTTAGTGGAGAGGATTGACAAAGCACTGCACTATTATTTTTCACTTTTTGACTGCTTGGAATGTTGTCTTCCAAGAACATCATTGGAAAGACAGAAGATTGAGAGCATGCTCCTTGGAGAGGAAATAAAGAACATTATTGCTTGTGAGGGGTTAGAAAGAATGCAGAGGCATGAGAAGCTTGAGAGGTGGATTTCAAGGCTGGAAATGGCTGGGTTTGGAAGGGTACCCTTTACTTACCCAGCAAAGTATCAGGCAAAGAGGATGTTGCAGAGCTATGGCCAAAGCCACAAGTACAAAGTTCAAGAAGAGAATGATTGTTTGCTTATCTGCTGGAATGATAGACCCCTTTTTTCTGTATCTGCCTGGAAGTTTGTGAGATAA 3378 0.4165 MENQARVLCSENQELAVYMWNKWKEMAEKPKGISENIEKTLSKAYHNICNSKTPIQTMKDFSQVKGVGKWILRLMQGFFEPGSGGSEPVDLSKKGKKTKGSNRYVPQKNSVAYALLIALYRGTSNGNEFMRKQELIDAAEASGLSRAPIVPEKGKGKPGQFGSSSREWYSGWSCMKTLITKGLVVKSSCPAKYMLTQEGKETARECLTRSGMANPEENLVTVESLSDVEEQNTSNMEFRGDDLEVEVTSPLAQKKKLMDVPLDSLERFTHMGYSKEQVICAFSEVSKSYPDKDVSLLWPSVLCHLREEQVYGLQSGSQNMRNNCQMRSTRTVANDRIGTETRPVNLSCSAHMPNRDATEFSLRACSSSDYAMHKSIKDGPELKMNVLSVPPLSLGERFEDAYEVILILDDREQFATQGSRSRRIIENICSQFKIQIEVRRLPVGDGIWIARHKTLDSEYILDFIVERKNIGDLRCSIRDNRYKDQKLRLLRCGLKKLIYLVEGDPNSSEAAESIKTACFTTEILEGFDVQRTSGLSDTLKKYGYLTQAISQYYKSRDLDEDIKFSKICPPFDEFIRRCQDLDKMTVSDVFATQLMQVPQVTEEIAMAVLDLYPTLHSLAHAYFLLESDVSAQQDMLRRQSNNVINAVASRNIFQCEEFEVGGLPDQLSNQQAMEFGLGSPYNPCLGSPYQWLREQRWDNNRGLNLIRLLRECAHCVACGSIKNADIGLEYISQLASPDGDSVQRMATYFSEALAYKIVKNLPGVYKALNSSKASSISEEPFVQNCFFKSCPFLKIAYLVTNQAIVEAMEGEKMVHIIDLHSSEPAQWVDLLQTLKKRREGPPHLKITGIHENKQVLDQMNFLLTREAEKLDFPLQFNALVSKLEDLDIERLPVKTGEALAISSVLQLHSLLATDDEMLGRNSPAPSMNLHRAVHMNQMTFAEWLEQKDMINAFLSPDSSLSPLSLGSSPKMGIFLNALRKFQPKIMVITEQESNLNGPNLVERIDKALHYYFSLFDCLECCLPRTSLERQKIESMLLGEEIKNIIACEGLERMQRHEKLERWISRLEMAGFGRVPFTYPAKYQAKRMLQSYGQSHKYKVQEENDCLLICWNDRPLFSVSAWKFVR 1125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g01216 1125 FunFam crossover junction endonuclease MUS81 isoform X1 400 548 - -
Bach9g01216 1125 SUPERFAMILY Restriction endonuclease-like 402 548 IPR011335 -
Bach9g01216 1125 CDD WH_MUS81 104 209 IPR047417 -
Bach9g01216 1125 Pfam ERCC4 domain 409 539 IPR006166 GO:0003677|GO:0004518
Bach9g01216 1125 SMART ERCC4_2 405 505 IPR006166 GO:0003677|GO:0004518
Bach9g01216 1125 Gene3D - 584 657 IPR042530 -
Bach9g01216 1125 Gene3D - 96 218 IPR036388 -
Bach9g01216 1125 FunFam Crossover junction endonuclease MUS81 96 217 - -
Bach9g01216 1125 PANTHER CLASS II CROSSOVER JUNCTION ENDONUCLEASE MUS81 1 655 IPR033309 GO:0006302|GO:0006308|GO:0008821
Bach9g01216 1125 ProSiteProfiles GRAS family profile. 696 1122 IPR005202 -
Bach9g01216 1125 MobiDBLite consensus disorder prediction 83 102 - -
Bach9g01216 1125 CDD XPF_nuclease_Mus81 402 549 IPR047416 -
Bach9g01216 1125 Pfam GRAS domain family 705 1122 IPR005202 -
Bach9g01216 1125 Gene3D - 398 548 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g01216 Bach-Chr9 9657075 9668325 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach9g01216 687 1122 GRAS Transcription Factor Family AT1G50420 52.360 8.32e-151 457
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Bach9g01216 GRAS 8.1e-120 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g01216 K08991 - gmx:100798497 931.784
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach9g01216 9 9657075 9668325 Bach9g01216 9 9657075 9668325 ECH