Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g01201 ATGGGTCGGGGAAAGATTGAGATCAAAAGGATTGAGAATGCTAATAGCAGGCAAGTCACATTCTCCAAGAGGCGAACTGGGCTGCTCAAAAAGGCACAGGAATTGGCTATTCTATGCGATGCTGAGGTTGCTGTGATTATCTTCTCCAATACTGGCAAGCTCTTCGAGTTTTCAAGTTCTGGTATGAAGCGAACACTTGCAAGATACAACAAATGCCTAGATTTGCCAGAGGCTGCTTTAGCAGAATATAAGACAGAGAAGGAAGAGTCTAAGGTAGTGGAAAATCTCAAAGATGAAATTGCAAAGCTAGAAAGAAAGCAGTTACAGTTGATGGGTAAGGATCTCACAGGCTTGGGCTTAAAAGAATTGCAACATCTAGAGCAGCAACTTAATGAAGGGTTATTGTCAGTCAAGGAGAGAAAGGAGGAAGTGCTTATGGAGCAATTGGAGCAGTCTAGAGTTCAGGTTGAGGAGCTTCGCTGTTTGTTCCCGCTAACAGAACATGTGGTTCCATCTTACCTTGAACACCAGCATATGGAAAGAAAGAAAGCCTTTGTAAATAATGGAGTCAGATGTCCTAACTTGACCAGTAATCCTTCAAATGAGAAATCAGATTCAGACACCACACTGCATTTAGGGTTGCCGAGTGATGTCCAGCACAAGAGGAAGGCACCTGTGAAAGAAACGTTTACCAAAAACTCAGAGAGTGCAATGACTCTACTCTGA 726 0.4298 MGRGKIEIKRIENANSRQVTFSKRRTGLLKKAQELAILCDAEVAVIIFSNTGKLFEFSSSGMKRTLARYNKCLDLPEAALAEYKTEKEESKVVENLKDEIAKLERKQLQLMGKDLTGLGLKELQHLEQQLNEGLLSVKERKEEVLMEQLEQSRVQVEELRCLFPLTEHVVPSYLEHQHMERKKAFVNNGVRCPNLTSNPSNEKSDSDTTLHLGLPSDVQHKRKAPVKETFTKNSESAMTLL 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g01201 241 FunFam MADS-box transcription factor MADS-MC 13 89 - -
Bach9g01201 241 MobiDBLite consensus disorder prediction 192 224 - -
Bach9g01201 241 ProSitePatterns MADS-box domain signature. 3 57 IPR002100 GO:0003677|GO:0046983
Bach9g01201 241 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 10 57 IPR002100 GO:0003677|GO:0046983
Bach9g01201 241 Gene3D - 13 81 IPR036879 GO:0003677|GO:0046983
Bach9g01201 241 ProSiteProfiles K-box domain profile. 86 180 IPR002487 GO:0003700|GO:0005634|GO:0006355
Bach9g01201 241 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
Bach9g01201 241 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
Bach9g01201 241 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Bach9g01201 241 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Bach9g01201 241 Coils Coil 86 113 - -
Bach9g01201 241 MobiDBLite consensus disorder prediction 192 213 - -
Bach9g01201 241 PANTHER SERUM RESPONSE FACTOR HOMOLOG 3 191 - -
Bach9g01201 241 CDD MADS_MEF2_like 2 72 IPR033896 GO:0000977|GO:0045944
Bach9g01201 241 Pfam K-box region 86 159 IPR002487 GO:0003700|GO:0005634|GO:0006355
Bach9g01201 241 ProSiteProfiles MADS-box domain profile. 1 61 IPR002100 GO:0003677|GO:0046983
Bach9g01201 241 SUPERFAMILY SRF-like 2 76 IPR036879 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g01201 Bach-Chr9 9482396 9485434 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach9g01201 1 236 MADS-box Gene Family AT5G13790 48.828 1.18e-74 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-MIKC Bach9g01201 K-box 3.9e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g01201 - - zju:107417456 337.035