Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g01158 ATGGAATATCATATCGTTGATATTGAATACTACTGCGAAGCTTTCCCACTAGACTCAGAAGAACAAGAACAAGAGTCTTCTTCTTCCTCCAAAGATCAATTCTTCAACATCAAGTTTGAAGTGGTAGTGTTGGACCTGTTTCATCCCCCTGTTGACGATCCTGATACCATGATCGGTCGTTATTGGGACCCCGATGAACATTTCTTCCCAAACATCCCCAGGGATTCTCTCTTAAAAGACCGAGAAACGACGTCGTCGACGGAGAACGAAGAACCCATATTACTAAACATGCTTTCTCAAATGGATATCCCCCACAGTGCTCAAAACTCCATGGTAGCCAAGATCTTGTCCTGTGCACGTGACATGGCTTATAGGACTCACAAGACCAGCAAGGTTCTTTCTTTGGAAGTGCAGATTTTCCTCACCAGGATCAATGAAGGCCAAGAACCTCAAGAACCAACCTTTGATGAAGGCGAAAATAATCATGGGTTGGTGCCTGCAACCGAGGCTTCTATTGAGCAATTGGAAAGGGTCAAGGTTGAGGGAGAAAGACAGAAGTGTGCGATTTGTTTGGAAGATTTCATGGTTGGTTTACAAGTTACTAGGATGCCTTGTTTGCATTTGTACCATGATAAGTGTATTGTGGATTGGCTGCATAAGAGGAATTCATGCCCGTTGTGTAGGTTTATGATGCCTCCTACTGGTGCAAGTGAATGA 717 0.4379 MEYHIVDIEYYCEAFPLDSEEQEQESSSSSKDQFFNIKFEVVVLDLFHPPVDDPDTMIGRYWDPDEHFFPNIPRDSLLKDRETTSSTENEEPILLNMLSQMDIPHSAQNSMVAKILSCARDMAYRTHKTSKVLSLEVQIFLTRINEGQEPQEPTFDEGENNHGLVPATEASIEQLERVKVEGERQKCAICLEDFMVGLQVTRMPCLHLYHDKCIVDWLHKRNSCPLCRFMMPPTGASE 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g01158 238 CDD RING-H2_PA-TM-RING 187 228 - -
Bach9g01158 238 ProSiteProfiles Zinc finger RING-type profile. 187 228 IPR001841 -
Bach9g01158 238 FunFam E3 ubiquitin-protein ligase RNF181 155 234 - -
Bach9g01158 238 SMART ring_2 187 227 IPR001841 -
Bach9g01158 238 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 154 234 IPR013083 -
Bach9g01158 238 SUPERFAMILY RING/U-box 180 232 - -
Bach9g01158 238 Pfam Ring finger domain 186 228 IPR001841 -
Bach9g01158 238 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 89 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g01158 Bach-Chr9 9080920 9081636 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach9g01158 145 232 C3H Transcription Factor Family AT5G01980 41.000 6.01e-16 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g01158 - - mtr:11431540 139.813