Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g01135 ATGTATAAGAGGGGTAATTGCAAGTTCTTTGCCCGTGGATTGTGTTGGAAAGGGGAGCAATGTGATTATTCTCATGCCAGAAAAGATCCCCCAGTTGATGTTTGCACATTCTATCAGAAAGGATTCTGTGCTTATGGTAGTCGATGCAGATATAAACACATCAAAGCTTCTCAAGCACAATCTTCAGCATCATCCTCAGCAAATAGAAACGAAACTCTTGCTTCAGATTCTGTTGTGGCCCATACTACAAGAGGCACATCATGTTGGGTTCAAAAGGCCACAAAATCATTGCCCTCTGACAAATCTGCACGGGGTCTAGAGCATAAGCACAAGAATTCTCCTGTGAATGGTGATGTTGGGGAATCCAGTGCTGCTTTACCATCTGAGTATTTCTTTTGCACATTTCCTGCTGCCAACTGCCCCTTAGAAGAAAAGTGTAATCGTATCCATGGAGACCAGTGCCTGTACTGTAAAAAGTACTGCTTACATCCTACTCAACATAATGAGAGAGAAAAACATTTGCAGACTTGTGAAAAAAAGGAAAAATACCTTCAGGCTTTGACGGACAGTCAAGAAATAGAATGCAATGTTTGCATGGAGCATGTTCTTTCGAAGCCTACAGCTGCTGAACGAAAGTTTGGGCTGTTTCCTGAATGTGACCATGCTTTCTGTATATCCTGCATCAGGAATTGGCGCAGTAGTGCAACTAATGTCCCAACTCCTGGAATGGATCTTACTAGTACAGTGAGGGCCTGCCCAGTGTGCCGCAAGCAGTCATATTTTGTCATTCCAAGTCCTATCTGGTATTCTACAAAGGAAGAAAAGCAGGAAATTATTGACAACTACAAGGCAACGTGCAAGTTAATTGATTGCAAGCATTTTGACTCTGGAAATGGAAACTGTCCTTTTGGGACTCGTTGTTTCTACAAGCATACTGTGAAGCCTGGCTCATACATGTGGAGACCCCATAGGACATCTCCACGCAGAGAAAATAGGTTTAGTAAGTATGACATGTTGGGTATGCTCAGTGAATTTGACTTAGAAGATGGAGAGTATTATTCCATCATGCAGGATTCAGAATTTCTCAGCGACATGGATCCATTCGAGTTGATGACTTTGTCAGACATGCTGAGTTGTGGTTCAGGGCCAGGGCCTTTTGGACCTGATGACGAAGATGAAGATTCTGATGATGAAAACATTTTTGGAATGACTAGTTTATCAGAAGCATTGGTGGGCGCTGCTATTGATGATTTTGATCCTGAAGATTCAGGCTTTGAAGAATTCGATCCCTCGGAGGCAGCAATAATGTCAATGATGATGTCTAATTTTGAAGAAGAAATGCGTGAACTGGAGGACCTATAG 1362 0.4244 MYKRGNCKFFARGLCWKGEQCDYSHARKDPPVDVCTFYQKGFCAYGSRCRYKHIKASQAQSSASSSANRNETLASDSVVAHTTRGTSCWVQKATKSLPSDKSARGLEHKHKNSPVNGDVGESSAALPSEYFFCTFPAANCPLEEKCNRIHGDQCLYCKKYCLHPTQHNEREKHLQTCEKKEKYLQALTDSQEIECNVCMEHVLSKPTAAERKFGLFPECDHAFCISCIRNWRSSATNVPTPGMDLTSTVRACPVCRKQSYFVIPSPIWYSTKEEKQEIIDNYKATCKLIDCKHFDSGNGNCPFGTRCFYKHTVKPGSYMWRPHRTSPRRENRFSKYDMLGMLSEFDLEDGEYYSIMQDSEFLSDMDPFELMTLSDMLSCGSGPGPFGPDDEDEDSDDENIFGMTSLSEALVGAAIDDFDPEDSGFEEFDPSEAAIMSMMMSNFEEEMRELEDL 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g01135 453 Gene3D - 1 69 - -
Bach9g01135 453 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 33 53 IPR000571 GO:0046872
Bach9g01135 453 MobiDBLite consensus disorder prediction 99 119 - -
Bach9g01135 453 ProSiteProfiles Zinc finger RING-type profile. 195 256 IPR001841 -
Bach9g01135 453 MobiDBLite consensus disorder prediction 101 115 - -
Bach9g01135 453 SUPERFAMILY CCCH zinc finger 31 53 IPR036855 GO:0046872
Bach9g01135 453 ProSitePatterns Zinc finger RING-type signature. 219 228 IPR017907 -
Bach9g01135 453 SMART c3hfinal6 29 55 IPR000571 GO:0046872
Bach9g01135 453 SMART c3hfinal6 3 27 IPR000571 GO:0046872
Bach9g01135 453 SMART c3hfinal6 285 313 IPR000571 GO:0046872
Bach9g01135 453 SMART c3hfinal6 127 152 IPR000571 GO:0046872
Bach9g01135 453 Coils Coil 433 453 - -
Bach9g01135 453 SUPERFAMILY CCCH zinc finger 5 26 IPR036855 GO:0046872
Bach9g01135 453 SMART ring_2 195 255 IPR001841 -
Bach9g01135 453 PANTHER MAKORIN-RELATED 6 335 IPR045072 GO:0000209|GO:0061630
Bach9g01135 453 SUPERFAMILY RING/U-box 185 262 - -
Bach9g01135 453 Pfam Zinc finger, C3HC4 type (RING finger) 195 255 IPR018957 GO:0046872
Bach9g01135 453 ProSiteProfiles Zinc finger C3H1-type profile. 285 314 IPR000571 GO:0046872
Bach9g01135 453 CDD RING-HC_MKRN 193 256 - -
Bach9g01135 453 ProSiteProfiles Zinc finger C3H1-type profile. 1 28 IPR000571 GO:0046872
Bach9g01135 453 ProSiteProfiles Zinc finger C3H1-type profile. 29 56 IPR000571 GO:0046872
Bach9g01135 453 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 167 285 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g01135 Bach-Chr9 8853420 8856876 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Bach9g01135 zf-C3HC4 2.4e-06 CL0229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g01135 K15687 - gmx:100788886 555.058