Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g01120 ATGTCGCCGGCAAAGCAAAGAACTCCCAAGGTAAGCAGAAACCCTGACCTCATTCGAGGTATTGGCAAGTACTCCCGATCACAGATGTACCACAAGAGAGGCCTCTGGGCTATCAAGGCCAAGAACGGCGGTAAATTCCCTCACCACGACCCCAAGCCGAAGCCTGAAGCACCGGCTGAGAAGCCACCCAAGTTTTACCCAGCTGATGATGTGAAGAAGCCCCTTGTCAACAAGCGCAAGCCAAAGCCAACCAAGCTCAGGGCTAGCATTACTCCTGGCACTGTTCTTATTCTCCTTGCTGGGAGATTCAAGGGAAAGAGAGTGGTGTTTCTGAACCAGCTTTCTTCCGGCTTGCTTCTTGTTACTGGTCCTTTCAAGATTAATGGAGTTCCATTGAGAAGGGTCAACCAGTCTTACGTCATTGGTACATCCACCAAGGTTGACATCTCTGGTGTTAATGTGGAGAAATTTGATGACAAGTACTTCGCAAAGGAAGTTCAGAAGAAGAAAACAAAGGGAGAAGGCGAGTTCTTTGAGGCAGAGAAGGAGGAGAAGAATGTGCTCCCACAAGAGAAAAAGGATGACCAAAAGACTGTCGATGCTGCTTTGATTAAGGCCATTGAGAGTGTTCCAGACTTGAAGACATATTTGGGTGCAAGATTCTCACTCAAGGCCGGCATGAAGCCTCATGAGCTGGTCTTCTAG 705 0.4837 MSPAKQRTPKVSRNPDLIRGIGKYSRSQMYHKRGLWAIKAKNGGKFPHHDPKPKPEAPAEKPPKFYPADDVKKPLVNKRKPKPTKLRASITPGTVLILLAGRFKGKRVVFLNQLSSGLLLVTGPFKINGVPLRRVNQSYVIGTSTKVDISGVNVEKFDDKYFAKEVQKKKTKGEGEFFEAEKEEKNVLPQEKKDDQKTVDAALIKAIESVPDLKTYLGARFSLKAGMKPHELVF 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g01120 234 FunFam 60S ribosomal protein L6 88 172 - -
Bach9g01120 234 MobiDBLite consensus disorder prediction 1 26 - -
Bach9g01120 234 Pfam Ribosomal protein L6e 127 234 IPR000915 GO:0003735|GO:0005840|GO:0006412
Bach9g01120 234 Gene3D - 88 172 IPR014722 -
Bach9g01120 234 SUPERFAMILY Translation proteins SH3-like domain 88 174 IPR008991 -
Bach9g01120 234 MobiDBLite consensus disorder prediction 43 77 - -
Bach9g01120 234 MobiDBLite consensus disorder prediction 41 86 - -
Bach9g01120 234 PANTHER 60S RIBOSOMAL PROTEIN L6 7 234 IPR000915 GO:0003735|GO:0005840|GO:0006412
Bach9g01120 234 Pfam Ribosomal protein L6, N-terminal domain 4 62 IPR005568 GO:0003735|GO:0005840|GO:0006412
Bach9g01120 234 CDD KOW_RPL6 82 234 IPR041997 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g01120 Bach-Chr9 8742580 8744247 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach9g01120 3 234 Cytoplasmic Ribosomal Protein Gene Family AT1G74050 84.914 1.43e-129 363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g01120 K02934 - rcu:8261126 383.259