Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g01101 ATGGAGCTTGATTTGAATCAAGATCCTTTGGACCAAACTCGTACTCCAGCAACGGGATTTGATTCTGTATTGAATGAAATAGAATCAGCGCATGAACATATAATCGAACGTATTCGACACCTTGAAGCTGTAACCTATAGAGCTAGGCAGCGTCAGAGGTGGCGGCAGAGTCACAATCACACTCCTGTTCAGATAATTCCTAGCAACACAGGAGGATTAACAACATCTAGTATTGTAGAAGAAATGGTGCACCAGGGAGAGGGTGGTAATGCTGTCCAGGAAGGAGCAGTCTACAGAGAGAAAACGGCCAAAAGGAGCAGTTCCTATTTAGTAGCTAGAGCATTGGAGATGGATACAGTCACAGACACCAAGAAGGCGGAGAGCAGCAATAATGGAAGCTTTTTTGATTGTAACATATGCTTGGACATGGCAAGTGATCCTATTTTGACCTGCTGTGGTCATTTGTTTTGCTGGCCATGCTTCTATCAGTTGTCACATTCCTATTCAAATGCAAGGGAATGTCCTGTTTGTAGAGGAGAGGTCACTGAAGCAGACATTATTCCAATTTATGGCAATGCTACTGTCTCTAGCAGCCTTGAATTGGAACTAAAAGAAGCTGGTTTGAGAGTACCTCCTAGGCCCAATGCTCGTAGAATTGAGAGTTTCAGGCAGCAACTCATAAGCCGGGGAGCATCTTCTGCAATCCAGGAAAGGATTCAGCAATTTAGTAACATGATAGGAGGAATAGGAGAGCGAGTTCGGTTAGGCAGCCCTGAGCCTGCTGGTGATAGAACTCACCTTTTGGCCAATCAATCTCTCACTTTTCCATTACAAGCATTATCCAGCATTGAGACAGAGAACAATCAACATCCTCGTTCCCATCAAGTTTCAAGATTGTTAATGCAAGGAGTTGCTTCCTTTTCATCCCTTTCATCAGCACTAAATTCAGCTATGGATTCTGCTGAAAGATTAGTTGAGGACCTTGAAACATATATTCACAATCACCATCCAGGAGGAGGCCGACAGCTAAATCCAGGTGTTGTTAATGGAGATTCTCCTTCTAACATTGTTGCTATGACCCAATCAGCGGTTAATACTCCAGATGTTGTTGCTGCAACCAATTCAGTGGCCATGGCTTCTGTTTCTCCTTCAACTAGGAATAATGGTGCTACTGCTGTTATAGGCTTAGAAATCCAAACAGATAGCGCTGCAGAGATTACTTCAATAAACCCTTCTTCCTCGTCTTCCCATAGAACTAATGTTTTAAGACTTCCAGACACTGACAATGACAACGGAATTTCAAATGAGCCCAGAAGGAGAAGGTTAAGGTGA 1332 0.4332 MELDLNQDPLDQTRTPATGFDSVLNEIESAHEHIIERIRHLEAVTYRARQRQRWRQSHNHTPVQIIPSNTGGLTTSSIVEEMVHQGEGGNAVQEGAVYREKTAKRSSSYLVARALEMDTVTDTKKAESSNNGSFFDCNICLDMASDPILTCCGHLFCWPCFYQLSHSYSNARECPVCRGEVTEADIIPIYGNATVSSSLELELKEAGLRVPPRPNARRIESFRQQLISRGASSAIQERIQQFSNMIGGIGERVRLGSPEPAGDRTHLLANQSLTFPLQALSSIETENNQHPRSHQVSRLLMQGVASFSSLSSALNSAMDSAERLVEDLETYIHNHHPGGGRQLNPGVVNGDSPSNIVAMTQSAVNTPDVVAATNSVAMASVSPSTRNNGATAVIGLEIQTDSAAEITSINPSSSSSHRTNVLRLPDTDNDNGISNEPRRRRLR 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g01101 443 ProSiteProfiles Zinc finger RING-type profile. 137 178 IPR001841 -
Bach9g01101 443 Pfam Zinc finger, C3HC4 type (RING finger) 137 183 - -
Bach9g01101 443 SUPERFAMILY RING/U-box 136 184 - -
Bach9g01101 443 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 118 191 IPR013083 -
Bach9g01101 443 MobiDBLite consensus disorder prediction 407 443 - -
Bach9g01101 443 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATED 100 294 IPR045103 GO:0005783|GO:0006511|GO:0061630
Bach9g01101 443 MobiDBLite consensus disorder prediction 407 431 - -
Bach9g01101 443 CDD RING-HC_RNF5-like 135 178 - -
Bach9g01101 443 SMART ring_2 137 177 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g01101 Bach-Chr9 8435377 8436708 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach9g01101 117 420 C3H Transcription Factor Family AT3G58030 31.686 3.08e-37 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g01101 - - qsa:O6P43_029476 412.149