Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g01064 ATGGCAACCACCACAACCGCTGCCGATGCTTCGCGCCAGCTTTCACAGAAGGAGGCTGACATCCAGATGATGTTGGCCGCCGAGGTCCACCTCGGTACGAAAAATTGTGACTTTCAGATGGAGCGCTATGTTTTCAAGCGCCGCAACAATGGTATTTACATAATCAACCTTGGTAAAACATGGGAGAAGCTCCAGCTTGCTGCCAGGGTTATTGTTGCCATTGAAAACCCCCAGGATATTATTGTTCAGTCAGCCAGGCCTTATGGTCAGAGAGCAGTTCTCAAGTTTGCCCAGTACACCGGTGCCCATGCAATTGCCGGAAGGCATACTCCTGGTACATTCACCAATCAGCTCCAGACATCATATAATGAGCCTCGCCTTCTCATTCTGACTGATCCAAGAACAGACCACCAGCCCATTAAAGAAGCTGCTCTTGGAAATATACCAACTATCGCCTTCTGTGACACTGATTCTCCAATGCGTTATGTTGATATTGGCATTCCTGCTAACAATAAGGGGAAGCATAGCATCGGTTGTCTATTTTGGCTATTAGCCAGGACGGTACTGCAGATGAGGGGTACCATTCGTCCAGGGCTTAAGTGGGATGTGATGTATGAGTATGTTCCGTTGCCACACAGTTTCCTCTCTGCAAGAATCGAAATTGAATTATGCCATTTTCTTGCAAGACACGACAAAGAACCTGAAGAGGCCAAGCAACAAGAGGAAGAGGAAGTTCCTCCTGCACAAGATTATGCCATTGCGGACTTCAGTGCCAGTGGTATTGCTGCTGATGGTCAGTGGCCTGCTGCAATTGATAAATCTTGGACTGATTCAGTTCCACAACCAATTCCAGCCGTTCCCAGTGTCGGCTGGACTGCAGAAGTTGTTGCAGGAGATTGGGGTGAAGCTGCCGTTCCACCTCGTCAAATTCCTCCTCCAGGAATTGAAAATGTTCCTGCTACTGGCTGGGATTAA 975 0.4821 MATTTTAADASRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNNGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSYNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARTVLQMRGTIRPGLKWDVMYEYVPLPHSFLSARIEIELCHFLARHDKEPEEAKQQEEEEVPPAQDYAIADFSASGIAADGQWPAAIDKSWTDSVPQPIPAVPSVGWTAEVVAGDWGEAAVPPRQIPPPGIENVPATGWD 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g01064 324 Pfam Ribosomal protein S2 121 189 IPR001865 GO:0003735|GO:0005840|GO:0006412
Bach9g01064 324 Pfam Ribosomal protein S2 24 119 IPR001865 GO:0003735|GO:0005840|GO:0006412
Bach9g01064 324 SUPERFAMILY Ribosomal protein S2 16 206 IPR023591 -
Bach9g01064 324 CDD RPS2 24 190 IPR001865 GO:0003735|GO:0005840|GO:0006412
Bach9g01064 324 ProSitePatterns Ribosomal protein S2 signature 2. 125 149 IPR018130 GO:0003735|GO:0005840|GO:0006412
Bach9g01064 324 PRINTS Ribosomal protein S2 signature 51 60 IPR001865 GO:0003735|GO:0005840|GO:0006412
Bach9g01064 324 PRINTS Ribosomal protein S2 signature 142 153 IPR001865 GO:0003735|GO:0005840|GO:0006412
Bach9g01064 324 PRINTS Ribosomal protein S2 signature 125 142 IPR001865 GO:0003735|GO:0005840|GO:0006412
Bach9g01064 324 PRINTS Ribosomal protein S2 signature 100 117 IPR001865 GO:0003735|GO:0005840|GO:0006412
Bach9g01064 324 PRINTS Ribosomal protein S2 signature 21 39 IPR001865 GO:0003735|GO:0005840|GO:0006412
Bach9g01064 324 PRINTS Ribosomal protein S2 signature 163 177 IPR001865 GO:0003735|GO:0005840|GO:0006412
Bach9g01064 324 Gene3D - 20 213 - -
Bach9g01064 324 PANTHER 40S RIBOSOMAL PROTEIN SA 10 206 IPR005707 GO:0003735|GO:0006412|GO:0015935
Bach9g01064 324 MobiDBLite consensus disorder prediction 303 324 - -
Bach9g01064 324 NCBIfam 30S ribosomal protein S2 16 206 IPR005707 GO:0003735|GO:0006412|GO:0015935
Bach9g01064 324 ProSitePatterns Ribosomal protein S2 signature 1. 21 32 IPR018130 GO:0003735|GO:0005840|GO:0006412
Bach9g01064 324 FunFam 40S ribosomal protein SA 20 247 - -
Bach9g01064 324 Hamap 40S ribosomal protein SA [rps-0]. 8 270 IPR027498 GO:0003735|GO:0006412|GO:0015935
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g01064 Bach-Chr9 8018687 8020547 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach9g01064 8 306 Cytoplasmic Ribosomal Protein Gene Family AT3G04770 67.774 1.50e-142 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g01064 K02998 - gmx:100805318 497.278