Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g01052 ATGGGCCACCGGTGCTGCAGCAAACAGAAGATCAAAAGGGGCCTTTGGTCCCCAGAAGAAGATGAGAAGCTCATCAGACATATCACCACCCATGGTCATAAAAGCTGGAGTTCAGTCCCAAAGATTGCAGGATTGCAGAGGTGTGGAAAGAGTTGCAGATTGAGATGGATAAACTATTTGAGACCAGACCTCAAGAGGGGATCGTTCACTGCTGAAGAAGAGCAGACCATAATTGATATTCATAGAATTCTGGGTAACAGATGGGCCCAAATAGCCAAGCATCTCCCAGGAAGGACAGACAACGAGGTCAAGAATTTCTGGAACTCCTGCATTAAAAAGAAGCTCATCTCTCAAGGGTTAGACCCACAAACTCACACTCTACTCTCTTCTCACAGGAGAGCCTCTGCATGTAACATCTCAGAAATCCATCCAAATACAAATTCCATTTTCACTCTGAATTCACTGATACCAAATGCTGCCATGGCTCCTTATAAAGCTCAACCAGATATAGTTCAGACTAATTCCACCATTTTTTCCTCTGAATATCAACCCTCTAGCATTATCTCCAATAATGTCCAAGCTCATGATTCCCTTAATTTCTCAGATTTCCCTTTTGTACCATCAATTGGGAGCACACACAATTTATGTCCTTCTTCCTGCTGCATGAATTACCCTTCTGCTGTTGGATTGTCAGACAATGAGAATAACATCTGGGTTTCCAGTGCTCAAACATTTGAAGGAGTACAAGCACAAGTACAGCAAGCAAAGGAGAAGATAAGTGAGAAGGGAATTGATGATGCCAGAGAATTAACCAAGGGCAATCCTGAAATGAATAATGCTTCTTTTGAGAGTGCAAACTTTGATTTTGGGTTGTTGGAGAGTGTACTTGCTAGTGAATTCATGTCCAATGATCTGAGCTCTATGGATGACCTTGCATGGAACTTTTAG 948 0.4241 MGHRCCSKQKIKRGLWSPEEDEKLIRHITTHGHKSWSSVPKIAGLQRCGKSCRLRWINYLRPDLKRGSFTAEEEQTIIDIHRILGNRWAQIAKHLPGRTDNEVKNFWNSCIKKKLISQGLDPQTHTLLSSHRRASACNISEIHPNTNSIFTLNSLIPNAAMAPYKAQPDIVQTNSTIFSSEYQPSSIISNNVQAHDSLNFSDFPFVPSIGSTHNLCPSSCCMNYPSAVGLSDNENNIWVSSAQTFEGVQAQVQQAKEKISEKGIDDARELTKGNPEMNNASFESANFDFGLLESVLASEFMSNDLSSMDDLAWNF 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g01052 315 Gene3D - 13 65 - -
Bach9g01052 315 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
Bach9g01052 315 CDD SANT 68 108 IPR001005 -
Bach9g01052 315 FunFam MYB transcription factor 5 65 - -
Bach9g01052 315 ProSiteProfiles Myb-like domain profile. 8 60 IPR001005 -
Bach9g01052 315 Pfam Myb-like DNA-binding domain 66 109 IPR001005 -
Bach9g01052 315 Pfam Myb-like DNA-binding domain 13 60 IPR001005 -
Bach9g01052 315 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 60 IPR017930 -
Bach9g01052 315 SMART sant 12 62 IPR001005 -
Bach9g01052 315 SMART sant 65 113 IPR001005 -
Bach9g01052 315 FunFam Transcription factor MYB86 67 141 - -
Bach9g01052 315 CDD SANT 16 60 IPR001005 -
Bach9g01052 315 Gene3D - 68 115 - -
Bach9g01052 315 SUPERFAMILY Homeodomain-like 10 107 IPR009057 -
Bach9g01052 315 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 61 115 IPR017930 -
Bach9g01052 315 PANTHER MYB DOMAIN PROTEIN 55 1 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g01052 Bach-Chr9 7917754 7919003 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach9g01052 1 133 MYB Transcription Factor Family AT3G12720 85.714 2.40e-87 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bach9g01052 Myb_DNA-binding 8.9e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g01052 K09422 - gmx:100791209 400.979