LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach9g00977	ATGAAATCGACCAGAGAGAAGGAGAACAATCGATGCATTACCTTGCATATGCACAACCTCCATCAGCGTCTCTATCATGCATTAAATCTTGGCACCAGATGTTTTGATGAGAAGACGAACAAGTGGAGATGGAAGTGCGCTAACATTGAAGTACAGAAACAAGTACTTCGCTCAATAGATGCTTTTCTTGATTCTTTATCTGGAGATGCACAGGCACCACACCATACTATAGTTAAGGATTCTATTGATGATGTTTTGGGAGCACTATTGTGGATTCTTCACGGAAAAAATGGGCTCTTGTTATCTATGGCAGCTAATTCGGCAGTCAAGTTGGTTAGTGGATTACCCAATTCAGTATGGCAATCTCATATTTTTGATCTTATCCATCCTCTATCAACCTTGCTATCGTCACATCAAACAGACATTGCAGTACCATGCACAATTGCTTTGAATTTGATAATCTCTAATTCGAGTGTTACAAGTGAGAAGGCAGTTTGGGAGGTATTGAATGAAACAGAGTGTGTACTTCGTATTGTTGGGAATATAAACAATTTTACCAGAGGTGTGATGAAAATCGAATACTTTGAAGTGATGGCTTCACTTTTGAGCACAGTACTGTGGCGATGGCCTCCATCTAGATTTCCTGTTTGGAATGATGTTAAACTAATGAAAACTTTAGCAGACATGCATATAAAGACAGATTTTTCTACTAGGCTTGCAGTTTTGAAGCTGTACAAATCTTTAGCTTTATGTGGCACTGTGGCCAAAAGACTTATAGAAGATGGAGAAGTTTTTCTACAGATGGTTGTGCAATCAATGGGCAAATCATACCCTCATGTCATTCGATTAGAGGGATTTACGCTTGCTCAATGTCTATTAGTATCCCAGGAGAATTGTATGAAGGTGATGGATTTTTGTGGTGAAGCTCTTGTCGAAGCCATAATTTGTGGGATGGGAGAAATGGGATATAATTTTACAAAACCTGCAAAGAACCGTATCTCCTTATTAGTGGAAGCATGTCAGTTGGCTCTACTAACTCGTTGGGCAGGTGAGCATCATATTACTTTCTGGAAGCAAGGAATTGATACAGTCCTCCTTAATCTTTTGATAGAAGATATTCTAGACAAATCGTATGAACATGTCTTGTCACTAGAAGAACAAATATCCTTAGTGAAGGAGGGGCTGAAGGCCAACTATCTTCTTGGTGTGAGAGGTTATGTATGGGACATTCTAGGATGGATTGCAATTCATTGTGGAGAAAATTTCAACCCTATTACACATGGAAGTGAGCTACACACCAACTTACTTATCACATGTGCATGCTTAACTTTTGTGGATGAAATTGAAAAATGGTGCCGAATATGTCAAAAGGATGTTGGTGATAATGTTACGAGTGAACCAGTATCAAGGGCTGTTCTAATGATGATTTATTCTCCATGCAATTACATTGCCTCACAGGCCAGATTCATATTATCTGGTATACTAAAGGGAAAAGGCATTGCATACCTGAAAAACTTAATACATACTCTAGATTATGCATCATCCTTACTGAGCTATGGTTCATTTGATAAGCTTCAGCTTGCTATTAACTTGATTGGGTTGACGTGTTTTTCAAGTTTACCAGAGTATCAAAGATATATCACTGAAAGCAAAGAGTTAAAGGCTGTTCTTGTTATTGTACAGCGATGCTTAAGCAATGAAATCCATGTAGAAAGGCTCAGCTTTGCTCCTCATTTGCATACAACATTTTGTGGAAGGACTTGTTGTTGGATCTACGCAGAAGATTGGGAAGGTTCCAATATTCTACTGTTTTATGGTTTCTGGGGCTTAGCTGAAGTAATTCATCAGTGTGGCTCTTTACAAGATAATCCTAGTATATTCACTCAAGAGATAGCATCTATTGAAGCACAATTATTTAGCAAGCTTCATGAGATATGTAGTAGCACCACTTTCAGTCCTGGATTGAAATGGTATGCTACCTATATTCTTAGTTACTTTGGATTTTATGGTTTCCCAAATGAACTTGCACAAAGGATTGGGAAATCTCTTAATGAGAAAGAATATGCAGACATTCAACTCATTGTAGCCAATGGGGATTCTTTGAGTGTTCATGGTGTTTTTCTTGCTGTTCGATGTCCATCACTTCTGCCTCCTGAAGGCTTACCTGTTGAGGCAAAAGGAAATGACAGTTTATCATCAAGAGAGCTAACAGATAAGTTTTCCAGAGAGACCATGAGAGAAGTTCGTTTATCTGCTCATGTTGATTATGAAGCATTGGTGAAGCTGTTGGAATATATTTACTTGGGTTGTTTACATTCCGAGGAAGAAACTGTTAAGAAGTTGAAAGTACTTGCTAAGCGATGCAATCTACATCCTCTCTTGCGTACTCTTTATAGGCAAAGGCCAAAGTGGGGCATGTCATTTCCAAGCTTAGACCTTTCTTCATATCTTGGTTCAGCTGGAAGTTGTTTTTCGGATGTCATATTGGAATCTAATACTGATAAACTCGTTGGCTGGACATGCAATATCTGTTCACACTCATTGCCACATTTCCATGTTCACAAAGTTATATTGCAGTCTGGCTGTGATTATTTGCAGGGTTTATTCCGCTCAGGAATGCAGGAAAGTCATTCACAAATCATAAAGGTGGATATTAGCTGGGAAGCAATGGGTATACTAGTACACTGGTTTTATTCCAATGAGCTACCAAATCCTTCCTCTGGGTGTTTGTGGGATAATATGGATAATGAAAAAAAGCTATCGCAGCTGCAAGCATATGTGGAACTGTGTTGGCTTGCTGAGTTCTGGGTCTGTGAAAATATTCAGGAACCCTGCTGGAATGTGGTTATGTCATGTCTTGATTCTGCCAAGCATTTGTCCATGAAAATTATCAAAATGGCTGCTAATTACTCTTTGTGGAAGTTGGTTGATGTTGCAGCAAATTACTTGGCTCCTTCATATTGTGAACTACGTGATTCTGGTGAACTTGAAGAATTAGATGATATGCTAGTTCACTTAATTTATTCTGCTTCTCTTCGACTTGCCAAGAAGGCCGAAATTGCTTTTAGATGATTTGTGGTATAGCATATTCAGGAGGTGCTAAAATAACATTTTGGGAGATGAAAATGTTACGCCCTGTTAGGCCATGGAGACTGGAGAAATATTTGATTGGGCTTGAGCAAAGCCTTATGTGAACTATAGCACTTGAAATGATTCCTTGTGGTAGAGCTTTCGTGGATGAGTGTGATCGAAGATATCAGTTCACATATTTTGTTAACCACTTATCAGGTATCCAGTAATGCCTGAACTGGATCAATAGCAATACCTTTCGCCCGTTTGGAAACGGAGATAATACCATTCTCTGATGCAAGCTTCAGTGGTGATCC	3386	0.3895	MKSTREKENNRCITLHMHNLHQRLYHALNLGTRCFDEKTNKWRWKCANIEVQKQVLRSIDAFLDSLSGDAQAPHHTIVKDSIDDVLGALLWILHGKNGLLLSMAANSAVKLVSGLPNSVWQSHIFDLIHPLSTLLSSHQTDIAVPCTIALNLIISNSSVTSEKAVWEVLNETECVLRIVGNINNFTRGVMKIEYFEVMASLLSTVLWRWPPSRFPVWNDVKLMKTLADMHIKTDFSTRLAVLKLYKSLALCGTVAKRLIEDGEVFLQMVVQSMGKSYPHVIRLEGFTLAQCLLVSQENCMKVMDFCGEALVEAIICGMGEMGYNFTKPAKNRISLLVEACQLALLTRWAGEHHITFWKQGIDTVLLNLLIEDILDKSYEHVLSLEEQISLVKEGLKANYLLGVRGYVWDILGWIAIHCGENFNPITHGSELHTNLLITCACLTFVDEIEKWCRICQKDVGDNVTSEPVSRAVLMMIYSPCNYIASQARFILSGILKGKGIAYLKNLIHTLDYASSLLSYGSFDKLQLAINLIGLTCFSSLPEYQRYITESKELKAVLVIVQRCLSNEIHVERLSFAPHLHTTFCGRTCCWIYAEDWEGSNILLFYGFWGLAEVIHQCGSLQDNPSIFTQEIASIEAQLFSKLHEICSSTTFSPGLKWYATYILSYFGFYGFPNELAQRIGKSLNEKEYADIQLIVANGDSLSVHGVFLAVRCPSLLPPEGLPVEAKGNDSLSSRELTDKFSRETMREVRLSAHVDYEALVKLLEYIYLGCLHSEEETVKKLKVLAKRCNLHPLLRTLYRQRPKWGMSFPSLDLSSYLGSAGSCFSDVILESNTDKLVGWTCNICSHSLPHFHVHKVILQSGCDYLQGLFRSGMQESHSQIIKVDISWEAMGILVHWFYSNELPNPSSGCLWDNMDNEKKLSQLQAYVELCWLAEFWVCENIQEPCWNVVMSCLDSAKHLSMKIIKMAANYSLWKLVDVAANYLAPSYCELRDSGELEELDDMLVHLIYSASLRLAKKAEIAFR	1023

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach9g00977	1023	CDD	BTB_POZ_ZBTB_KLHL-like	850	902	-	-
	Bach9g00977	1023	Gene3D	Potassium Channel Kv1.1; Chain A	671	800	IPR011333	-
	Bach9g00977	1023	Pfam	BTB/POZ domain	850	910	IPR000210	GO:0005515
	Bach9g00977	1023	SUPERFAMILY	ARM repeat	51	424	IPR016024	-
	Bach9g00977	1023	SMART	BTB_4	689	805	IPR000210	GO:0005515
	Bach9g00977	1023	SMART	BTB_4	825	953	IPR000210	GO:0005515
	Bach9g00977	1023	ProSiteProfiles	BTB domain profile.	825	906	IPR000210	GO:0005515
	Bach9g00977	1023	PANTHER	OS06G0674800 PROTEIN	5	1017	IPR044953	-
	Bach9g00977	1023	Gene3D	Potassium Channel Kv1.1; Chain A	819	993	IPR011333	-
	Bach9g00977	1023	SUPERFAMILY	POZ domain	850	949	IPR011333	-
	Bach9g00977	1023	SUPERFAMILY	POZ domain	668	796	IPR011333	-

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TR	TRAF	Bach9g00977		BTB	4.5e-08	CL0033

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach9g00977	-		-	gmx:100786565	1421.76