Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g00938 GCCAACTGTTCACTATTCCAAACACCACCTCCACTACTTGTGCAGCTCACCTTCTCTCTTGCTCACTCTCTCCGTCTGATAATTTCTTCCAAAACCCTAATTCTCCTTCTCCCCTGCCATAGTTTTCCGATTTCCTAGCATTTATTACATTTGTTTATAGACGGGGACTCTTAACCCGATTGCATTTCTAGTTCTGCAAATTCTGAGATTTTCTTTCTGGGCAGCCGCGGAATAAGAAAATCTGTTCAATTTGTTGAATTTATTTCATTTTTATTTAAAAAAAAAATTCTTCTTTAAAGTTTAAATATCGAAAATTATCGAGGATATTGGGGTTGGATTCTATGGCTGCGGTTGCTGAGGTTTCCGTTGATGCAGCAGCTGCCAACAAGTTGGACTCCAAACCCAAATCCGATTCCGAATTCAATGTGCAGAAGCTCGTTGATATGTTCACAAAGTTGAATCCTTCGGCAAAAGAGTTTTTTCCTTCATCTTACTCTCATCATGATCATCCTCATCAGGACTATATTCAATTCTCACCTAACAATTTTGCGGTCAACACTAAGCCGTCAGCTAATGACAATTACCCAAACAACCCAAGGAGAAGAAACAGCTTTAACCAGGGCAGAAGAAGGTTGAATGGAAGAGCGATTAAGGCTCAAAGAGAAGATAGCGTAAGAAGAACTGTATATGTTTCTGATATAGATCAGCATGTTACTGAGGAGCGGCTGGCTGCCTTATTTAGCGGTTGTGGACAAGTAATTGATTGCCGAATCTGTGGTGATCCACATTCTGTTCTTCGTTTTGCATTTGTGGAGTTTGCAGATGAGCGAGGTGCAAGAGCAGCTTTGAACCTTGGTGGAACTGTGCTTGGGTACTATCCAGTCAGGGTCCTTCCTTCAAAAACTGCTATTCTTCCTGTGAATCCGACATTCCTTCCTAGGTCAGATGATGAGCGGGAAATGTGTACCAGGACTGTCTATTGTACAAATATTGATAAAAAGATTTCACAAGCTGAAGTGAAGAACTTCTTTGAAGCAGCTTGTGGCGAGGTCACTCGCTTGAGGCTTTTAGGGGATCATGTTCATTCAACTCGAATAGCTTTTGTGGAATTCTCAATGGCTGAAAGTGCCATTATTGCACTAAATTGCAGCGGGATGCTTTTGGGAAGCCAGCCTATCAGAGTAAGTCCTTCGAAGACGCCTGTGAGACCTAGGGTCGCTCGTCCAACATCAGTTTAA 1238 0.4208 MAAVAEVSVDAAAANKLDSKPKSDSEFNVQKLVDMFTKLNPSAKEFFPSSYSHHDHPHQDYIQFSPNNFAVNTKPSANDNYPNNPRRRNSFNQGRRRLNGRAIKAQREDSVRRTVYVSDIDQHVTEERLAALFSGCGQVIDCRICGDPHSVLRFAFVEFADERGARAALNLGGTVLGYYPVRVLPSKTAILPVNPTFLPRSDDEREMCTRTVYCTNIDKKISQAEVKNFFEAACGEVTRLRLLGDHVHSTRIAFVEFSMAESAIIALNCSGMLLGSQPIRVSPSKTPVRPRVARPTSV 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g00938 298 Gene3D - 198 291 IPR012677 -
Bach9g00938 298 Gene3D - 67 189 IPR012677 -
Bach9g00938 298 SMART rrm1_1 114 184 IPR000504 GO:0003723
Bach9g00938 298 SMART rrm1_1 211 282 IPR000504 GO:0003723
Bach9g00938 298 FunFam Polyadenylate-binding protein-interacting protein 11 78 190 - -
Bach9g00938 298 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 210 286 IPR000504 GO:0003723
Bach9g00938 298 CDD RRM1_CID8_like 111 190 IPR034823 -
Bach9g00938 298 Pfam Ataxin-2 C-terminal region 35 50 IPR009818 -
Bach9g00938 298 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 35 292 - -
Bach9g00938 298 SUPERFAMILY RNA-binding domain, RBD 77 189 IPR035979 GO:0003676
Bach9g00938 298 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 212 280 IPR000504 GO:0003723
Bach9g00938 298 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 115 177 IPR000504 GO:0003723
Bach9g00938 298 FunFam Polyadenylate-binding protein-interacting protein 10 204 282 - -
Bach9g00938 298 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 113 188 IPR000504 GO:0003723
Bach9g00938 298 MobiDBLite consensus disorder prediction 74 89 - -
Bach9g00938 298 MobiDBLite consensus disorder prediction 74 94 - -
Bach9g00938 298 CDD RRM2_CID8_like 206 287 IPR034825 -
Bach9g00938 298 SUPERFAMILY RNA-binding domain, RBD 200 291 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g00938 Bach-Chr9 7038117 7042460 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach9g00938 110 267 Eukaryotic Initiation Factors Gene Family AT1G34140 26.708 1.57e-11 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g00938 - - qsa:O6P43_029291 494.197