Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g00891 ATGGATGGTAGGTTCCATGGCTTACCTCCTCTGAAACGATTGAGAATCATCCAACAAGAAGATCAAAAGCTTCAGCAATGGGAGCAACAAAAACCCTTACCCACAAAGAAGCGAAAGGAGACTCGGTCTGCCACTGCTTACTCTTTGCCTGCTAAGAAAAGGGTTTGGGCACTTCAACCTGAACCGATTCACACTTTAGCTGTTTCTGAACCTCTATTTGATCTCAATGTTGAATATAAACTATCTGTTGAAGAAGAGATTACCCCAGAAGATCATGAACCCAATAATGAGATCCCAGTAGTGGCAGATTCAGATAATCAATCTATTGAAAACCCCCAAGATGAAAAGGAAGAAGATAGAGGTGGAGAGATTGATGGTGATGAGGATGACGACGATGTGATTGTATGCACTGTATGTGGAAGCACAGATGGTGACCCTGCGGATCCAATTGTTTTCTGTGATGGATGTGATTTAATGGTGCACGCCACTTGCTATGGCAATCCCCTTGTAAAGGGTGTACCAGAAGGTGATTGGTTTTGTGATGAGTGCCTTGCTTCGTCGTCTTCTAAATCAAGGAAGGGTGAAAAGGGTTTTTCTTGCTGCCTCTGCCCTATCAATGAAGGGGCAATAAAACCCACAACGGATGGGATGTGGGCGCATATTGTCTGTGCACTTTTGGTCCCTGAGGTGTTTTTTAGGGACCCAGAAGGCAGAGAGGGAATTGATTGTTCTCAGGTTCCCAACAAGAGGTGGTTGGAAAAATGTTACAGTTGCAATTCTTTGAATGGGTGTGCTATTGTGTGTTCTGAGTCAAAATGCCCTTTAGCTTTCCATGTTACTTGTGGATTGAAAGAGGATCTTAGCATTGAGTACAAAGAAGGGAAGAATAGTGCTACTATTGTTGCTGGTTTCTGCAAAACCCACACTGAATTATGGAAAAAGCAACAGCAATCTGGGAAATATAAAATAGTTGCTGTCTGA 981 0.4302 MDGRFHGLPPLKRLRIIQQEDQKLQQWEQQKPLPTKKRKETRSATAYSLPAKKRVWALQPEPIHTLAVSEPLFDLNVEYKLSVEEEITPEDHEPNNEIPVVADSDNQSIENPQDEKEEDRGGEIDGDEDDDDVIVCTVCGSTDGDPADPIVFCDGCDLMVHATCYGNPLVKGVPEGDWFCDECLASSSSKSRKGEKGFSCCLCPINEGAIKPTTDGMWAHIVCALLVPEVFFRDPEGREGIDCSQVPNKRWLEKCYSCNSLNGCAIVCSESKCPLAFHVTCGLKEDLSIEYKEGKNSATIVAGFCKTHTELWKKQQQSGKYKIVAV 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g00891 326 ProSiteProfiles Extended PHD (ePHD) domain profile. 197 309 IPR034732 -
Bach9g00891 326 CDD PHD_BRPF_JADE_like 136 183 - -
Bach9g00891 326 MobiDBLite consensus disorder prediction 22 46 - -
Bach9g00891 326 Pfam PHD-finger 135 184 IPR019787 -
Bach9g00891 326 SUPERFAMILY FYVE/PHD zinc finger 127 190 IPR011011 -
Bach9g00891 326 SMART PHD_3 254 309 IPR001965 -
Bach9g00891 326 SMART PHD_3 135 184 IPR001965 -
Bach9g00891 326 PANTHER PHD FINGER PROTEINS 77 309 - -
Bach9g00891 326 Pfam PHD-zinc-finger like domain 199 308 - -
Bach9g00891 326 ProSiteProfiles Zinc finger PHD-type profile. 133 186 IPR019787 -
Bach9g00891 326 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 109 196 IPR013083 -
Bach9g00891 326 MobiDBLite consensus disorder prediction 85 129 - -
Bach9g00891 326 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 197 311 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g00891 Bach-Chr9 6639861 6640941 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach9g00891 33 325 C2H2 Transcription Factor Family AT3G14740 57.190 1.13e-113 331
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Bach9g00891 zf-HC5HC2H_2 5.1e-28 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g00891 K11380 - qsa:O6P43_001103 418.313