Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g00890 CTTTCTTCTTGTGTTGTTGGTGAGCCATGGAACATCTGGTTAATATGCATCGCCATCTACTTGACAAGGAGCTAAGCATCTCACCGGTGACAAACAAGACGCGTGAATTTTCCATGGGCAATGTGAATTTTGATACCAACATGGTCATGGTATTGACCGCTCTCTTGTGTGCATTAGTATTTGCTCTTGGGTTGAACTCAATTCTGCGCTGTGCTAGGCGTTGTGGCCGTAGATTTCCCACAGAGATCCAACTGCAAACATCTTCAAGGCTTTCTACAACTGGCCTAAAAAAGCGTGATTTGAGTCAGATTCCGGTGGTAGTGTACGGCTCCGGCGTGGATATTCCAGCTACGGAGTGCCCCATTTGTCTTGGGGAGTTCGAGATGGGAGACAAGGTCCGATTGCTGCCACAATGCAAACATGGGTTCCATGTGAAGTGCATAGATACGTGGCTTGTGTCAAATTCTTCTTGCCCAATTTGTCGCCTTTCACTGCTCGAGCAATCAACTTCAATAAATTCAAATGCAAGCCGAGAAGTCGCCGGAGATCGGCCACCGGGAGATGGCTCCAGCCGGCAAGATAACGTTATTGTGGTCGTCGACCGGGCAATCTGAATGGAACATCTGGTTAATATGCATCGCCATCTACTTGACAAGGAGCTAAGCATCTCACCGGTGACAAACAAGACGCGTGAATTTTCCATGGGCAATGTGAATTTTGATACCAACATGGTCATGGTATTGACCGCTCTCTTGTGTGCATTAGTATTTGCTCTTGGGTTGAACTCAATTCTGCGCTGTGCTAGGCGTTGTGGCCGTAGATTTCCCACAGAGATCCAACTGCAAACATCTTCAAGGCTTTCTACAACTGGCCTAAAAAAGCGTGATTTGAGTCAGATTCCGGTGGTAGTGTACGGCTCCGGCGTGGATATTCCAGCTACGGAGTGCCCCATTTGTCTTGGGGAGTTCGAGATGGGAGACAAGGTCCGATTGCTGCCACAATGCAAACATGGGTTCCATGTGAAGTGCATAGATACGTGGCTTGTGTCAAATTCTTCTTGCCCAATTTGTCGCCTTTCACTGCTCGAGCAATCAACTTCAATAAATTCAAATGCAAGCCGAGAAGTCGCCGGAGATCGGCCACCGGGAGATGGCTCCAGCCGGCAAGATAACGTTATTGTGGTCGTCGACCGGGCAATCTGAATGTTCAGACACCAATTCCCTAATATTGGTAGATAGTAGCTGTAGCTTGCAAGAAAGAATTGTATTTGCCACTCAAAGGCCAATTTCAATTTTATGTACAAAAGGGGCATCATAGATTCATCTCTCTCCATTTTCGTGACAAATATTTGGCAAAGATTACGCAGCAGGGATACTATCAAGCCAAGGGGCCTAGGACCAGGTCAGGACTGCTGTTTTGACTGCTAAGCATGCCGGTAAATATGTGGTTTCGGCTGCTAGATCACTGTTCTCAATAGCTTGTGCTCTCAATTGTAATCATTGGTGCATTTCTGAATCACTTCTTCCAATCCGTCGTTGATTTTGGAGACACCCTGTACCTCGTGACTTGAAGAAAAGGACTGAAATATTTAGCAATATTCTAGGTCAAGTTTTT 1614 0.4641 MEHLVNMHRHLLDKELSISPVTNKTREFSMGNVNFDTNMVMVLTALLCALVFALGLNSILRCARRCGRRFPTEIQLQTSSRLSTTGLKKRDLSQIPVVVYGSGVDIPATECPICLGEFEMGDKVRLLPQCKHGFHVKCIDTWLVSNSSCPICRLSLLEQSTSINSNASREVAGDRPPGDGSSRQDNVIVVVDRAI 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g00890 195 SUPERFAMILY RING/U-box 93 159 - -
Bach9g00890 195 CDD RING-H2_EL5-like 110 153 - -
Bach9g00890 195 ProSiteProfiles Zinc finger RING-type profile. 111 153 IPR001841 -
Bach9g00890 195 Pfam Ring finger domain 110 153 IPR001841 -
Bach9g00890 195 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 73 157 IPR013083 -
Bach9g00890 195 PANTHER RING-H2 FINGER PROTEIN ATL78 26 167 IPR044602 GO:0016567|GO:0016740
Bach9g00890 195 SMART ring_2 111 152 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g00890 Bach-Chr9 6636917 6638854 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach9g00890 7 162 C3H Transcription Factor Family AT3G10910 53.333 4.79e-53 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g00890 K19040 - zju:107431091 234.572