Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g00872 ATGCTCGTCCCAGCCTCTCTATATATAAATTGTGGTGGACCAGAGCTACCCTTAATTGCTGATGGAAATAAGAAATCAACGTATTATGCCGATCAAGATTTAGAAGGACCAGCAAGGCTTAAACTTTCCCAATCAAACTGGGCATTAAGTAGAACTGGTGACTTCTACGATATGGGTGGCTCATCCTACTATACCGTGTCAGATGAATATAATATGATAAATGGTAAACTGTACAAAACTGCACGTGTTTCTGCCATGTCTCTGACTTATTATGGATATTGCCTGCGTGATGGAAACTACATAGTGAGACTCCATTTCGCGGAGATAATGTTTACAAACAACAAAACATATAGTAGCCTAGGAAGGCGTGTATTCAATGTCTACATTCAGGGAAAGCTGCAGCTGAAGAATTTCGATATTGTAAAAGCAGCAGGAGGAGTGGGTAAAGTAACCATACAAAGTTTTACTGCCGTAGTAAATAGTAGTGGTACCTTAGAGATCCGCTTCTATTGGGCTGGAAAAGGGATCACTTATTTCCCAAGTAAATTGGTATACGGTCCTCTTATATCAGCTATATCAGTGGAAGGTGACTTTCCAACGGAAAATGAAAGTAGCATGCCTGTAGGGGCTGTGGTTGGAATTGTAGCTGCAGGAGTAATTGTCATTGTTCTGGTATTTGTTCTACTTTGGTTGAGAGGCTGTCTAGGACAAAAGGGTTCATTAGCTAGAGAGATGAAGGGTTTAGACCTTCAAACCAGCTTATTTAGCTTACGGCAAATAAAAGCCGCAACAAACAACTTTGATATTACCAATAAAATTGGAGAAGGAGGGTTTGGTCCTGTTTACAAGGGTTTTCTTCCAGATGGTACAATAATCGCAGTTAAGCTACTTTCTTCCAAATCAAAACAAGGAAATCGGGAGTTTATAACTGAGATAGGCATGATTTCTGGTTTGCAACATCCTTATCTTGTTAAACTCTACGGTTGTTGTGTCGAGGGAGATCAGCTATTGCTAGTGTACGAATACATGGAAAACAATAGTCTTGCTCGTGCATTATTTGGCCGAGAAGAAAATAAAATAAAATTGGATTGGCCAACAAGGTATAAGATTTGTGTTGGTATTGCTAGAGGTTTGGCTTACCTCCATGAAGAATCAAGACTAAAAATTGTTCATAGGGACATCAAGGCTACTAATGTATTGCTTGACAAAGACCTAAACCCAAAAATATCTGATTTTGGTTTGGCCAAACTTGATGAAGAAGATAATACCCATATAAGCACCAGAATTGCTGGGACTTATGGTTACATGGCTCCAGAATATGCAATGCATGGCTATTTGACTGATAAAGCAGATGTTTATAGTTTTGGAATTGTTGCCTTAGAAATTGTCAGTGGAATGAACAACACAGTTCGTAGAACAAAGGAAGAAAGCTTCCTTCTTCTTGAATGGGCATATCTCTTGAAAGAAAAAGGTAATTTACTGGAGCTAGTCGATCCAAGGCTGGGTTCAGATTTCAACAAAGAGGAAGCCATGGTGATGATCAAAGTGGGTCTCCTATGCACCAATGTCAGCGCAGCACGTAGACCCATCATGTCTTCAGTGGTAAGCATGCTTGAAGGCAGAGCTGTTGTTCCAGAGTTGGTTGAAGAGTCAAGTGAGGTTTTAGATGAAAAGAAGTTGGAGGCAATGAGACTGTGTCATCAACGGATGGAAGAAAACAATGAAAGTGAAATTCAGAAACAGACTGCATCAACATACGGACCATGGACTACTTCATCTTCATCAGCCGCAGATCTCTATCCTGTCCACCTTGATTCTTCTTACTGGGATAAAAGAAATTAA 1842 0.3996 MLVPASLYINCGGPELPLIADGNKKSTYYADQDLEGPARLKLSQSNWALSRTGDFYDMGGSSYYTVSDEYNMINGKLYKTARVSAMSLTYYGYCLRDGNYIVRLHFAEIMFTNNKTYSSLGRRVFNVYIQGKLQLKNFDIVKAAGGVGKVTIQSFTAVVNSSGTLEIRFYWAGKGITYFPSKLVYGPLISAISVEGDFPTENESSMPVGAVVGIVAAGVIVIVLVFVLLWLRGCLGQKGSLAREMKGLDLQTSLFSLRQIKAATNNFDITNKIGEGGFGPVYKGFLPDGTIIAVKLLSSKSKQGNREFITEIGMISGLQHPYLVKLYGCCVEGDQLLLVYEYMENNSLARALFGREENKIKLDWPTRYKICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEEDNTHISTRIAGTYGYMAPEYAMHGYLTDKADVYSFGIVALEIVSGMNNTVRRTKEESFLLLEWAYLLKEKGNLLELVDPRLGSDFNKEEAMVMIKVGLLCTNVSAARRPIMSSVVSMLEGRAVVPELVEESSEVLDEKKLEAMRLCHQRMEENNESEIQKQTASTYGPWTTSSSSAADLYPVHLDSSYWDKRN 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g00872 613 Pfam Malectin domain 7 192 IPR021720 -
Bach9g00872 613 ProSitePatterns Serine/Threonine protein kinases active-site signature. 389 401 IPR008271 GO:0004672|GO:0006468
Bach9g00872 613 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 4 197 - -
Bach9g00872 613 CDD STKc_IRAK 273 540 - -
Bach9g00872 613 MobiDBLite consensus disorder prediction 572 595 - -
Bach9g00872 613 Pfam Protein tyrosine and serine/threonine kinase 269 478 IPR001245 GO:0004672|GO:0006468
Bach9g00872 613 SUPERFAMILY Protein kinase-like (PK-like) 251 546 IPR011009 -
Bach9g00872 613 ProSiteProfiles Protein kinase domain profile. 267 555 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach9g00872 613 SMART serkin_6 267 531 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach9g00872 613 Gene3D Phosphorylase Kinase; domain 1 237 342 - -
Bach9g00872 613 Gene3D Transferase(Phosphotransferase) domain 1 343 554 - -
Bach9g00872 613 Gene3D - 5 196 - -
Bach9g00872 613 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 236 342 - -
Bach9g00872 613 MobiDBLite consensus disorder prediction 577 595 - -
Bach9g00872 613 FunFam Putative LRR receptor-like serine/threonine-protein kinase 343 550 - -
Bach9g00872 613 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 40 570 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g00872 Bach-Chr9 6466771 6469552 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach9g00872 5 595 Receptor kinase-like Gene Family AT1G53440 57.261 0.0 661
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bach9g00872 PK_Tyr_Ser-Thr 3.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g00872 - - qsa:O6P43_001072 817.764