LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach9g00854	ATGACTTCTCGATTCCTCCTCCTTTCATTCCTGGCTTTTTGCTTTGCATTTGCTTCTGATGCCACTCTGGTCAAAGATGAAGTGGAAGCTCTCAAAATAATAGCTAAGACACTTGGAAAGTATGACTGGGACTTCAGCGTAGATCCATGCAACGGCGGAGCTGGGAACTGGAGATCACCTGAGACTACAGCAACTGGACTATATGAAAATACTGTCGAGTGTGAATGCAGCACTACTGCCAGTAACACCGTCTGCCACGTGACGAAAATAAGTTTAGAAGCACAAAGTCTTAACGGAACGCTCCCTCCGGAATTGGTCAACTTGCCTTACCTCCAAACAATTGATCTCAACCGCAACTATCTTAATGGTACAATTCCTAAAGAATGGCGCTTCTTGAATCTCGTTAGCATTGCTCTTCTTGGAAACCGACTAACTGGTCCATTCCCAATAGAGCTGATAAATATTACCACTCTCCAAGAATTAGGAACTGAACTTACACATGTGATGGATAGGGTCCTGGCATCCAATCAATTTTATGGAAATCTTCCTCCAGGACTTGGGAATTTTTCCAAGATTATAAAATTGCATCTTTCCTCCAACTACTTTACTGGAGAATTACCTGAAACATTGGCAAAACTCACTAAATTAACGGATTTTCGAATCAGTGACAATCAACTCTCTGGAAAGATACCCAACTTTATTCAAAATTGGAAAAATCTTACGAAACTGCATATTCAAGGGAGTGGGTTGAGTGGGCCAATTCCTTCCGAAATATCATTTCTTAAAAATTTAGATGACTTGAGAATCAGTGATTTGAATGGATCAGATTCAACCTTGTTGCGACTTGATAACATGAAAAAGTTAAAAACATTAGACCTTAGTTTTAACAAATTAACAGGAGAACTTCCGAAAAACTTCTCTGACATAAACGCTACATACATATTTCTCACTGGAAACCTTCTCAGTGGAACGGTGCCCAATTGGACCGGCAAAGAAATCAAATTGGATCTTTCATATAACAACTTCAGCACTCGAAACACAGGGCAGGACACATGCCAAGATGGAAATATGAACTTGTTTGCAAGCTCTTCAACGGGAAATATTAGCTCAGGACTTGTTTCTTGTCTGAAAAACATCGATTGCAAGAAGAAATCCCATTACTCTTTCCACATAAATTGTGGTGGAAATCAGGTAACTTATCGAGGCACAACATATGATAAGGATTCAGATACAGCTGCAGCAGCAACCTTCATCAACAGTGGATCAAACTGGGTAATTAGCAACACTGGTTACTACTTAGGTAGTGAAGATAAACGTTATGATGTCCAAGGAAAAAGTTCTGACCTCTCTACGCACAATGCTGACAATGCTGATGACCTTTACATGAACGCACGCATTTCTCCTATTTCTCTGACTTATTATGGCTTTTGTCTGGTAAATGGAAATTACACAGTAAATCTTCATTTTGCGGAGATAATGTTTAGTGATGATAAAAATTATGGCAGCTTAGGGAGGCGGATATTTGATGTCTATATTCAGGGAAAGCGAGAGCTCAAGGATTTCAATATTGCAAGTGAAGCCGGAGGAGTTGGAAAGCCGATCGTGAAAAGTTTCCGTGCTGTTTTGACTAATAATGCATTGGAGATTCGCTTTCAGTGGGCTGGGAAAGGGACAACTACTATCCCTTATAGATCAGTGTATGGTCCTCTTATATCAGCCATATCTGTGGAATCTGACGTTGAACCACCAGAGAAAGGAAGTAGCATTCCTGCTGAGGCTCTTGTTGGAATTGTGGCAGCAGGAGTAATCCTTGTCATGCTAGTATTTGCCTTGTTGCATCGTCTAAAACAGAAACGTTCTTTAGCAAGAGAGGTAAGAACATTGAATCTACAAACCAGTTTATTCAACTTACGGCAGATAAAAACTGCAACAAACAACTTTGATATCACTAACAAGATTGGAGAAGGAGGGTTTGGTCCTGTATACAAGGGAACTCTGTCAAATGGCACAAGAATAGCAGTTAAGCAACATTCTTCTAGATCAAGGCAAGGGAATCGTGAGTTTATAAATGAGATAGGCTTAATTTCAGCTTTACAACACCCTTGTCTTGTGAAACTATATGGTTGTTGTGTTGAGAGTGACCAGTTGTTGCTGATATATGAATACATGGAAAACAATAGTCTTGCTCGTGCTTTATTTGGCCGAGAAGAATACCAAATAAAACTAGATTGGCCCACAAGGCACAAGATTTGTGTTGGTATTGCTAGAGGTTTGGCTTACCTTCATGAAGAATCAAGACTAAAGATTGTGCATAGGGACATCAAAGCTACTAATGTGTTGCTTGATAAAGATCTCAATCCAAAAATATCTGATTTTGGCTTGGCCAAGCTTGATGAAGAGAATAATACCCACATGAACACTAGAATAGCTGGGACCTATGGATATATAGCTCCTGAATATGCAATGCATGGTTATTTAACTGACAAAGCAGATGTCTATAGTTTTGGAATTGTTACATTAGAAATTGTTAGCGGAAGCACTAATACCATTCACGAGCCAAAAGATCAATGTCTCTATCTTCTTGATTGGGCACATCTCTTGAATGAGAAAGGCAATCTTATGGAGCTCGTTGATAAAAGGTTGGGTTCACACTTCAACCAAGAGGAGGCAATGGTGATGATCAAAGTGGCTCTCCTATGCACCAATGTCACTGCAACACTTAGGCCCACCATGTCTTCAGTGGTAAGCATGCTTGAAGGCAGAGCTGTTGTTCCAGAGTTAACTGCAGAGTCAAGTGAGGTTTTGGATGAAAAGAAGTTGGAGGCAATGAGAATGTATTGCCAACAGATAGAAGAAAACAAGGAAAGTGAAACTCAGAAACAGAGTACATCAGTGGACGGATATTGGACCGCTGTATCTTCATCAGCTGCAAATCTCTATCCTGTTTGCCTTGATTCTTCTTAA	2964	0.4005	MTSRFLLLSFLAFCFAFASDATLVKDEVEALKIIAKTLGKYDWDFSVDPCNGGAGNWRSPETTATGLYENTVECECSTTASNTVCHVTKISLEAQSLNGTLPPELVNLPYLQTIDLNRNYLNGTIPKEWRFLNLVSIALLGNRLTGPFPIELINITTLQELGTELTHVMDRVLASNQFYGNLPPGLGNFSKIIKLHLSSNYFTGELPETLAKLTKLTDFRISDNQLSGKIPNFIQNWKNLTKLHIQGSGLSGPIPSEISFLKNLDDLRISDLNGSDSTLLRLDNMKKLKTLDLSFNKLTGELPKNFSDINATYIFLTGNLLSGTVPNWTGKEIKLDLSYNNFSTRNTGQDTCQDGNMNLFASSSTGNISSGLVSCLKNIDCKKKSHYSFHINCGGNQVTYRGTTYDKDSDTAAAATFINSGSNWVISNTGYYLGSEDKRYDVQGKSSDLSTHNADNADDLYMNARISPISLTYYGFCLVNGNYTVNLHFAEIMFSDDKNYGSLGRRIFDVYIQGKRELKDFNIASEAGGVGKPIVKSFRAVLTNNALEIRFQWAGKGTTTIPYRSVYGPLISAISVESDVEPPEKGSSIPAEALVGIVAAGVILVMLVFALLHRLKQKRSLAREVRTLNLQTSLFNLRQIKTATNNFDITNKIGEGGFGPVYKGTLSNGTRIAVKQHSSRSRQGNREFINEIGLISALQHPCLVKLYGCCVESDQLLLIYEYMENNSLARALFGREEYQIKLDWPTRHKICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEENNTHMNTRIAGTYGYIAPEYAMHGYLTDKADVYSFGIVTLEIVSGSTNTIHEPKDQCLYLLDWAHLLNEKGNLMELVDKRLGSHFNQEEAMVMIKVALLCTNVTATLRPTMSSVVSMLEGRAVVPELTAESSEVLDEKKLEAMRMYCQQIEENKESETQKQSTSVDGYWTAVSSSAANLYPVCLDSS	987

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach9g00854	987	FunFam	probable LRR receptor-like serine/threonine-protein kinase At1g53430	616	722	-	-
	Bach9g00854	987	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	769	781	IPR008271	GO:0004672\|GO:0006468
	Bach9g00854	987	Gene3D	Ribonuclease Inhibitor	164	378	IPR032675	-
	Bach9g00854	987	Gene3D	Phosphorylase Kinase; domain 1	609	722	-	-
	Bach9g00854	987	SUPERFAMILY	L domain-like	85	330	-	-
	Bach9g00854	987	CDD	STKc_IRAK	653	920	-	-
	Bach9g00854	987	Pfam	Leucine Rich Repeat	287	307	IPR001611	GO:0005515
	Bach9g00854	987	Pfam	Protein tyrosine and serine/threonine kinase	649	918	IPR001245	GO:0004672\|GO:0006468
	Bach9g00854	987	Gene3D	Transferase(Phosphotransferase) domain 1	723	933	-	-
	Bach9g00854	987	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED	8	955	-	-
	Bach9g00854	987	FunFam	Putative LRR receptor-like serine/threonine-protein kinase	723	930	-	-
	Bach9g00854	987	ProSiteProfiles	Protein kinase domain profile.	647	987	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bach9g00854	987	SMART	serkin_6	647	918	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bach9g00854	987	Gene3D	Ribonuclease Inhibitor	43	163	IPR032675	-
	Bach9g00854	987	Pfam	Malectin domain	388	574	IPR021720	-
	Bach9g00854	987	Gene3D	-	384	579	-	-
	Bach9g00854	987	FunFam	Putative LRR receptor-like serine/threonine-protein kinase isoform A	206	273	-	-
	Bach9g00854	987	FunFam	Putative leucine-rich repeat receptor-like serine/threonine-protein kinase	386	579	-	-
	Bach9g00854	987	SUPERFAMILY	Protein kinase-like (PK-like)	629	920	IPR011009	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach9g00854	Bach-Chr9	6165580	6177424	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bach9g00854	17	978	Receptor kinase-like Gene Family	AT1G53420	51.555	0.0	938

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Bach9g00854		PK_Tyr_Ser-Thr	1.7e-47	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach9g00854	-		-	gmx:732563	1186.79