LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach9g00844	TAATCTCTCTCAAGGATATATTTTCAGTCTATGCATCCACCGCCAGCTGCAGCTCAATTAAAATGAGTTTACTTCGATACTTGCTGCATTTCCTCCATATTCTCTGGTTAGCATCTTTAGCTTCTGGAGCCTTGTCAGGAGATGAAGTGGAAGCTTTGAAAGACATAGCTAATGCACTTGGGAAGACTAATTGGGACTTCAGCGTGGATCCATGCACTGGTGGAAGTAATTGGATTACGCCCTCCACGGCTAATGGAGACGAAAATAATGTCACCTGCGGCAACTGCTCTATCGACCAAATTTGCCATGTTGTTCGCATAGTATTGAAAGGACAAAACCTTCAAGGTACCCTACCATTGGACCTGGTCAGGTTGCCTTACCTTCAAGAATTTGATGTCGCTCGCAACTACCTTAACGGTTCAATCCCTAAAGAATGGGGCTCCATGCAACTTGTCAGCATTACCCTTCTTTCAAACAGAATAACGGGTCCAATCCCAGTGGAGCTGGCAAACATCAGCACTCTCCAAAGCTTGGTTTTGGAATTCAATCAGTTGTACGGAAATCTTCCCCCTGAGCTTGGCAATCTAATTCAGCTTGGAAGGCTGTTTCTTACCTCCAACAACTTTACTGGAGAAATACCTGCAACATTTGCAAGGCTCACTGCATTAACAGATTTTCGAATTGTTGACAATCAATTCTCTGGAACAATACCTCATTTTATCCAGAACTGGACAAATCTTACAAAACTAGTGATTCAAGGGAGTGGTTTGAGTGGGCCAATTCCTTCTGAAGTTTCATTCCTGACACAATTAACTGACCTGAGAATAAGTGATTTGAATGGACCAAGTTCAACTTTTCCACAACTTAATAACCTGACAAAGTTGAAAACATTGATATTAAGGAGTTGCAATATTAATGGAACACTGCCCGATTATCTTGGAACAATAACAACTATAAAAGTCTTAGACTTGAGCTTTAACAATTTAAGTGGGCCAATTCCAAACTCCTACGCTGGTCTAAGAAAGGCAGATTTCATATATTTAACTGGAAATTTTCTCAATGGGTCAGTGCCCACTTGGACTCCGGATTCAGGCTACATAGATCTTTCATATAACAACTTCAGCATAGGAAACCCAGGGCTGCAGACATGTCAAAATGGTGGCCTGAACTTGTTTGCAAGCTCTTCTCCAGTCAATGACTCAGGAACTGTTTCTTGTCTGAGAGTCAATGGTACCTGTAGGACAACCTACCACTTACTCAATATAAACTGTGGTGGTAAACAAGTAACAGTAACTGGCAACACCAATTATGATGCTGATTCAGATTCAGGAGGACCAGCACATTTCCACCAGGGTGGAACAAATTGGGCATATAGCAACACTGGTCACTTCTTGGATAATGACCAATCAGCCTACTATATCTGGTCTAATGATTCTAGGCCCTCAATGGACAATGCTGACCTGTACATGAATGCACGTGTTTCTCCCAATTCTCTGACTTACTATGGATTTTGTCTGGCAAATGGAAACTACAATGTTAATCTTCATTTTGCTGAGATAATGTTCAGTGATGATAGAACATATAGAAGCCTGGGAAGGCGTATATTTGATGTCTACATTCAGAGAAACTTGGTGCTTAAGGATTTCAATATTGCAGAAGAAGCAGGAGGAGTTCGTAAAGCAATTATAAAAAATTTCACTGCTGTGGTGACTAATAACACCTTGGAGATCCGCCTTCGTTGGGCTGGGAAAGGGACAATTGCTCTCCCTTTCAAAGCAGTATATGGTCCTCTTATATCAGCTATATCTGTGGTGGATCCTGGCTATAGACCTCCGTCGGAAAATGGAAAAAGCATATCTGCAGGAGCTGTTGTTGGAATTGTGGCTGCAGGAGCAATTCTTGTAATTCTGGTATTTGTTATACTTTGGTGGAGAGGCTGTCTAGGACAGAAAAGTTCATTAGCAAGAGAGCTAAAGGGTTTAGATCTCAAAACCGGCCTATTTACTTTACGGCAAATCAAAGCAGCAACAGATGACTTCAATATCACCAATAAGATTGGAGAAGGAGGGTTTGGTCCTGTTTACAAGGGGTTTCTTTCAGATGGAACCGTAGTTGCAGTTAAGCAACTTTCTTCTAAATCAAAGCAAGGAAATCGTGAGTTTGTAAATGAGATAGGTGTGATTTCTGCTCTTCAACATCCCTGTCTTGTTAAACTCTATGGTTGTTGTGTTGAGGGAGATCAGTTGTTGTTGGTATATGAATACATGGAAAACAATAGCCTTGCACGTGCTTTATTTGGTCCACAAAAATACCAATTACATTTAGATTGGCCAACAAGGTATAGCATTTGTGTTGGTATTGCTCGAGGTTTGGCTTACCTTCATGAAGAGTCAAGACTTAAGATTGTTCATAGAGACATCAAAGCTACTAATGTGTTGCTTGACAAGGATCTCAGTCCAAAGATATCTGATTTTGGTTTGGCCAAGCTTGATGAGGAAGACAACACCCACATAAGTACTAGAATAGCCGGGACTTATGGATACATGGCTCCTGAATATGCAATGCATGGTTATTTGACTGATAAAGCAGATGTATATAGTTTTGGAATTGTTGTCTTAGAAGTTGTTAGTGGGAGGACCAACACAGCTCACGGCTCAAAGGAAGAATGCTTTTATCTTCTTGATTGGGCACATCTCTTGAAAGAAAGAGGTAATTTGATGGAGTTAGTTGATGGAAGGTTGGGCTCAGACTTCAGCAAAGAAGAGATAATGGTTGTCATTAATGTAGCTCTGCTGTGCACAAATGTCTCCCCAACACTCAGGCCTGCCATGTCTTCGGTGGTGAGCATGCTTGAAGGTAAAATTGTTGTTCCAGACTTGGTTTTAGAACCAAGTGAGGTATTGGATGAGAAGAAGTTGGAGGCAATGCGAAAATATTACCAACAGGTAGAAGAAGATGAGATAAGTGAGGTTAAGGACCAGAGCATTTCAATGAATGCAGCATGGACTGATTCATCAACATCAGCAACTGATCTCTATCCTGTGGAGCTGGATTCTTCTTACTGGGAGAAAAGAAACTAGAGAGTCTGCATGTTGTTATGATACCTGAAATTAATTTCAGCAAACGATATGTTGGATATCTTGCAGGGTTTGATGCATACTTCTGAATTTCCTTTTAAATTTGTGATTCCATGCCTTTCTACGTTATCTGTTGTGAAAGATGAGGTAAAAATATGTATTCAAGTCTGTTATAGCATATTATGTGCAGTAGTCTTTTCCACAAATTGTAAGGATGATAACATTTTTCCCTTTATAAATATATAGCATATGTAAGAGCAGAGTATTTTGGCA	3350	0.4042	MSLLRYLLHFLHILWLASLASGALSGDEVEALKDIANALGKTNWDFSVDPCTGGSNWITPSTANGDENNVTCGNCSIDQICHVVRIVLKGQNLQGTLPLDLVRLPYLQEFDVARNYLNGSIPKEWGSMQLVSITLLSNRITGPIPVELANISTLQSLVLEFNQLYGNLPPELGNLIQLGRLFLTSNNFTGEIPATFARLTALTDFRIVDNQFSGTIPHFIQNWTNLTKLVIQGSGLSGPIPSEVSFLTQLTDLRISDLNGPSSTFPQLNNLTKLKTLILRSCNINGTLPDYLGTITTIKVLDLSFNNLSGPIPNSYAGLRKADFIYLTGNFLNGSVPTWTPDSGYIDLSYNNFSIGNPGLQTCQNGGLNLFASSSPVNDSGTVSCLRVNGTCRTTYHLLNINCGGKQVTVTGNTNYDADSDSGGPAHFHQGGTNWAYSNTGHFLDNDQSAYYIWSNDSRPSMDNADLYMNARVSPNSLTYYGFCLANGNYNVNLHFAEIMFSDDRTYRSLGRRIFDVYIQRNLVLKDFNIAEEAGGVRKAIIKNFTAVVTNNTLEIRLRWAGKGTIALPFKAVYGPLISAISVVDPGYRPPSENGKSISAGAVVGIVAAGAILVILVFVILWWRGCLGQKSSLARELKGLDLKTGLFTLRQIKAATDDFNITNKIGEGGFGPVYKGFLSDGTVVAVKQLSSKSKQGNREFVNEIGVISALQHPCLVKLYGCCVEGDQLLLVYEYMENNSLARALFGPQKYQLHLDWPTRYSICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLSPKISDFGLAKLDEEDNTHISTRIAGTYGYMAPEYAMHGYLTDKADVYSFGIVVLEVVSGRTNTAHGSKEECFYLLDWAHLLKERGNLMELVDGRLGSDFSKEEIMVVINVALLCTNVSPTLRPAMSSVVSMLEGKIVVPDLVLEPSEVLDEKKLEAMRKYYQQVEEDEISEVKDQSISMNAAWTDSSTSATDLYPVELDSSYWEKRN	1005

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach9g00844	1005	FunFam	Probable LRR receptor-like serine/threonine-protein kinase At1g53420	25	259	-	-
	Bach9g00844	1005	Gene3D	Phosphorylase Kinase; domain 1	628	734	-	-
	Bach9g00844	1005	SUPERFAMILY	Protein kinase-like (PK-like)	643	946	IPR011009	-
	Bach9g00844	1005	Gene3D	Ribonuclease Inhibitor	263	376	IPR032675	-
	Bach9g00844	1005	Gene3D	-	395	586	-	-
	Bach9g00844	1005	Pfam	Malectin domain	398	581	IPR021720	-
	Bach9g00844	1005	SUPERFAMILY	L domain-like	64	338	-	-
	Bach9g00844	1005	FunFam	Putative LRR receptor-like serine/threonine-protein kinase	735	942	-	-
	Bach9g00844	1005	Pfam	Protein tyrosine and serine/threonine kinase	660	927	IPR001245	GO:0004672\|GO:0006468
	Bach9g00844	1005	Gene3D	Transferase(Phosphotransferase) domain 1	735	936	-	-
	Bach9g00844	1005	Gene3D	Ribonuclease Inhibitor	28	192	IPR032675	-
	Bach9g00844	1005	Gene3D	Ribonuclease Inhibitor	193	262	IPR032675	-
	Bach9g00844	1005	ProSiteProfiles	Protein kinase domain profile.	659	939	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bach9g00844	1005	CDD	STKc_IRAK	665	932	-	-
	Bach9g00844	1005	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED	15	960	-	-
	Bach9g00844	1005	FunFam	probable LRR receptor-like serine/threonine-protein kinase At1g53430	628	734	-	-
	Bach9g00844	1005	SMART	serkin_6	659	928	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bach9g00844	1005	FunFam	Putative leucine-rich repeat receptor-like serine/threonine-protein kinase	396	586	-	-
	Bach9g00844	1005	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	781	793	IPR008271	GO:0004672\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach9g00844	Bach-Chr9	6036996	6044290	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bach9g00844	20	990	Receptor kinase-like Gene Family	AT1G53420	56.008	0.0	1047

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Bach9g00844		PK_Tyr_Ser-Thr	3.6e-47	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach9g00844	-		-	qsa:O6P43_001072	1354.73