LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach9g00843	ATGAGTTTACTTCGATGCTTGCTGCTTTTCCTCCATATTCTCTGGATAGCATCTTTAGCTTCTGGAGCCTTGTCAGGGGATGAAGGTCCAAAGTTCAATTTTGGATCCTCTGCATTTCAATTTACGCCAAGTGGGAGACAAGAGAGGAGAGGGAAAGTCTTCTGTTTTTTTTCACGCTTCGAGAAATTGACAACTGCCTTCCTCCCAAAGTTCTTAATAGAGCTAAAACAACAGAGTCTTCAAGGCATACTTCCACGAGAACTGACCAGGTTGCCTTACCTCCAGCAAATTGATCTCACTCGCAACTACCTTAACGGTACAATCCCTAAAGAATGGAGCTCATTGAATCTTGTCAACATTTCCCTTCTTGGAAACCGACTAACGGGTCCAATCCCAAAAGAGCTGGCAAACATTACAACGCTCAAAAGTTTGGTCCTCGAGTACAATCAATTTTCTGGAAATCTTCCTCCAGAGCTTGGGAGTCTTGCTCAGCTTGAAAGACTGCTTCTTACCTCCAACAATTTTGCTGGAGAAATACCTGCAACTTATGCAAGGCTCACTGCATTGAAGGACATAGAGATTCAAGGGAGTGGTATGAGTGGACCAATTCCTTCTGGAATTTCTTTTCTTGATAAAATGACTGACTTGAGAATTAGTGATCTGAATGGATCTGACTCAACTTTTCCTGCACTTAATAATATGACAAAATTGGACAAATTAGACCTCAGCTTTAACAAATTGACTGAACGTATTCCAAACAGCTATGTTGGCCTAACAAATGTGGATTACATATTTTTAACTGGCAACCGTCTCACTGGAGATGTGCCTCAGTGGACTGAGAAAGCAGATAACTTAGATCTTTCATATAACAACTTCAGCTCTGAAAGCACAGAGCAGCAATGTCAGAAAGGAAGCACGAACTTGTTTGCAAGCTCTTCAATGGGCAATACCTTAGGAACTGTTTCGTGTTTGAGAAGCATTCGCTGTCCAAAAACCTTCTACTCTCTACATATAAATTGTGGTGGGAGGCTTGTAACTGTTAATGAGAGTAAAACATATGAAGGTGATTCAGATACATCAGGTCCAGCAAGATACCACCAGGGTGGAACAAACTGGGCATTTAGTACCACTGGTTTCTACTTGAATAATGATCGCTCAGACTACTATACCGTGCCAAATACATCTAGGCTCTCTATGACCAATGTGGAATTGTACACGAATGCACGTGTTTCTCCTATTTCTCTGACTTATTATGGATTTTGTTTGGGAAATGGAAACTACACAGTAAATCTTCATTTTGCGGAGATAATGTTCTCTAATGATAACACATACAACAGCCTGGGAAGGCGTATATTTGATATCTACATTCAGGGTAAACTGGTGCTAAAAGATTTTAATATTGCAAAAGAAGCAGAAGGAGCTGGCAAGGCAGTTATAAAACCATTTACGGCTGTTGTGACTGCCAATACCTTGGAGATCCGCCTCTACTGGGCTGGGAAAGGGACTACTGGGATGCCATTTAGAACAGTGCATGGTCCTCTTATATCTGCTATATCTGTGGATTCTGATTTTCCACCCCCGGTGGAAGATGAAAGTAGCAGCACACCTGTAGGGACTGTGGTAGGAATAGTGGCTGCTGTAGCTGGTGTGATTATTCTGGCACTTGCTGTACTTTGGTGGAGAGGCTGTCTAGGAAAGAAAAGTTCGTTAGCAAAAGATCTAAAAGGTTTAGATATGAAAACTGGTTTGTTTAGCCTTAGACAAATCAAAGCAGCAACAAACAACTTTGATGCCGCCAATAAAATTGGAGAAGGAGGGTTTGGTCCTGTTTTCAAGGGGTTTTTGTCAGATGGCACAATAATAGCAGTTAAGCAACTTTCTGCTAAATCAAGGCAAGGGAATCGTGAGTTTATAAATGAGATAGGCATGATTTCTGCTTTGCAACACCCTTATCTTGTTAAGCTCTACGGCTGTTGTGTTGATGGGGATCAATTGTTGGTCGTATATGAATACATGGAAAATAATAGCCTAGCTCGTGCTTTATTTGGCCCAGAAGAATGTCAATTGAAATTGAATTGGCTAACGAGGCAAAAGATTTGTGTTGGTATTGCTAGAGGTTTGACTTATCTCCATGAAGAATCAAGATTGAAAATTGTTCATAGGGATATCAAGGCCACTAATGTGTTACTTGATAAAGATCTCAATCCAAAAATTTCTGACTTTGGTTTGGCTAAGCTTGATGAAGAGGACAATACCCACATAAGCACTAGAATAGCTGGCACTTACGGATATATGGCTCCTGAATATGCAATGCATGGTTATTTGACTGACAAAGCAGATGTGTATAGTTTTGGAATTGTTGCCTTGGAAGTTGTCAGTGGGAGGGCCAACATCCTTCACCGGCCAAAGGGAGAAGCACTCTATCTTCTTGATTGGGCACATCTCCTAAAAGAGAAGGGTGACCTGATGGATATAGTTGATAAAAGGCTGGGTTCAGATTTCAACAAAGAGGAGGCAATGGTGATGATCAAAGTGGCACTCCTATGCACAAATGTCACTGCAGCGCATAGGCCGACCATGTCTTCAGTGGTAAGCATGCTTGAAGGCAGCGTTGTTGTGCCGGAGTTAGTTGCAGAATCAAGTGAGGTATTGGATGAGAAGAGGTTGGAAGAAATGAGACAGTATTACCAACAGACCGACGAAAACAAGGAAAGTGAAATTCAGAAACAGAGTGCATCAATGGAGGGACCATGGACTGCTTCAACTTCATCAACTGCAGATCTCTATCCTGTCCATCTGGATTCTTCTTACCTGGAGGAAAGAAATTAA	2829	0.4157	MSLLRCLLLFLHILWIASLASGALSGDEGPKFNFGSSAFQFTPSGRQERRGKVFCFFSRFEKLTTAFLPKFLIELKQQSLQGILPRELTRLPYLQQIDLTRNYLNGTIPKEWSSLNLVNISLLGNRLTGPIPKELANITTLKSLVLEYNQFSGNLPPELGSLAQLERLLLTSNNFAGEIPATYARLTALKDIEIQGSGMSGPIPSGISFLDKMTDLRISDLNGSDSTFPALNNMTKLDKLDLSFNKLTERIPNSYVGLTNVDYIFLTGNRLTGDVPQWTEKADNLDLSYNNFSSESTEQQCQKGSTNLFASSSMGNTLGTVSCLRSIRCPKTFYSLHINCGGRLVTVNESKTYEGDSDTSGPARYHQGGTNWAFSTTGFYLNNDRSDYYTVPNTSRLSMTNVELYTNARVSPISLTYYGFCLGNGNYTVNLHFAEIMFSNDNTYNSLGRRIFDIYIQGKLVLKDFNIAKEAEGAGKAVIKPFTAVVTANTLEIRLYWAGKGTTGMPFRTVHGPLISAISVDSDFPPPVEDESSSTPVGTVVGIVAAVAGVIILALAVLWWRGCLGKKSSLAKDLKGLDMKTGLFSLRQIKAATNNFDAANKIGEGGFGPVFKGFLSDGTIIAVKQLSAKSRQGNREFINEIGMISALQHPYLVKLYGCCVDGDQLLVVYEYMENNSLARALFGPEECQLKLNWLTRQKICVGIARGLTYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEEDNTHISTRIAGTYGYMAPEYAMHGYLTDKADVYSFGIVALEVVSGRANILHRPKGEALYLLDWAHLLKEKGDLMDIVDKRLGSDFNKEEAMVMIKVALLCTNVTAAHRPTMSSVVSMLEGSVVVPELVAESSEVLDEKRLEEMRQYYQQTDENKESEIQKQSASMEGPWTASTSSTADLYPVHLDSSYLEERN	942

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach9g00843	942	SUPERFAMILY	Protein kinase-like (PK-like)	579	875	IPR011009	-
	Bach9g00843	942	CDD	STKc_IRAK	602	869	-	-
	Bach9g00843	942	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	718	730	IPR008271	GO:0004672\|GO:0006468
	Bach9g00843	942	ProSiteProfiles	Protein kinase domain profile.	596	876	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bach9g00843	942	Gene3D	Transferase(Phosphotransferase) domain 1	672	881	-	-
	Bach9g00843	942	FunFam	Putative LRR receptor-like serine/threonine-protein kinase	672	879	-	-
	Bach9g00843	942	FunFam	probable LRR receptor-like serine/threonine-protein kinase At1g53430	565	671	-	-
	Bach9g00843	942	SMART	serkin_6	596	867	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bach9g00843	942	FunFam	Putative leucine-rich repeat receptor-like serine/threonine-protein kinase	333	523	-	-
	Bach9g00843	942	Pfam	Protein tyrosine and serine/threonine kinase	599	867	IPR001245	GO:0004672\|GO:0006468
	Bach9g00843	942	Gene3D	-	333	523	-	-
	Bach9g00843	942	Pfam	Malectin domain	335	518	IPR021720	-
	Bach9g00843	942	SUPERFAMILY	L domain-like	73	300	-	-
	Bach9g00843	942	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED	73	902	-	-
	Bach9g00843	942	MobiDBLite	consensus disorder prediction	898	925	-	-
	Bach9g00843	942	MobiDBLite	consensus disorder prediction	909	925	-	-
	Bach9g00843	942	Gene3D	Phosphorylase Kinase; domain 1	565	671	-	-
	Bach9g00843	942	Gene3D	Ribonuclease Inhibitor	185	312	IPR032675	-
	Bach9g00843	942	Gene3D	Ribonuclease Inhibitor	71	184	IPR032675	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach9g00843	Bach-Chr9	6026620	6035601	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bach9g00843	75	927	Receptor kinase-like Gene Family	AT1G53420	54.515	0.0	949

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Bach9g00843		PK_Tyr_Ser-Thr	2.4e-46	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach9g00843	-		-	qsa:O6P43_001072	1236.86