Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g00815 CTTTCTCTTCTCTGTCATATGTCTTTGAGGAAGGTTTTTCGTTCTCGTAAATTTTCCAGATCCTTCAAGGAAGTTAGAGCCCTTGAGGAAGATGAGCAAAGGAACCGACTCGGTGGTGGCAGTGACGCGGATGGTGATTCGGGCGAGTCCGGTGAGGTCGTCCCCGCGTACGGCAATGCTTGGTCCTCCATGCTGCCGGAGCTCCTCGGGGAGATCATAAAGCGAGTGGAGGCCAGCCAGGAGCAGTGGCCCCATCGCCAAAACGTCGTCTCTTGTGCCTGCGTGTGTAAAAGGTGGAGGGAACTGACTCGGGATATCATACGGGCCCCTTCCCAGAGCGGCAAAATCACTTTTCCTTCTTGTCTTAAACAGCCAGGACCTCGTGATTTTTCACACCAATGTCTTATAAAGCGGAACAAGAGGACCTCAACGTTTTACTTATATCTCGCCCTTACACCATCATTCACAGATAAAGGGAAGTTCCTCTTCGCAGCTAGGAGATATAGGAGAGGTGCCCATACAGAGTATATAATATCACTGGATGCTGATGACTTATCCCAAGGGAGCAATGCTTATGTTGGAAAGTTAAGCTCGGATTTTCTTGGCACCAATTTCACAATCTATGACAGCCAACCACCCCATAATGGTGCAAAGCCATCAAGCAACAGGGCCAGCCGCCGTTTTGCCAGCAAGCAGATAAGCCCACAAGTCCCTGCGGGCAACTTTGAGGTGGGGCAGATCTCATACAAGTTCAACCTTCTAAAATCAAGAGGGCCTAGGAGGATGATTTGCTCGTTGAAATGCCCTGCTTCTTCATCAGGAGAAAGTCCAGATGGCAGATCACTGGAAGACCATAATGTAAACGATAAAGAACAAGCTGCTACTAGCTGCTCAATTTTGAAAAATAAAGCTCCAAGGTGGCACGAGCATTTGCAGTGCTGGTGCTTGAATTTCCATGGTCGTGTGACAGTAGCATCAGTGAAGAACTTTCAGCTAGTTGCGACTGTGGACCAAAGCCAGCCAGGAGGGAAAGGAGACGAAGAAACGGTCCTCCTCCAGTTTGGGAAAGTAGGAGATGATACATTCACCATGGATTATAGGCAGCCCTTATCCGCCTTCCAGGCTTTTGCCATTTGCTTAACTAGCTTTGGCACTAAACTGGCATGCGAGTAAATATGTTTTTGTTGTCATTATGCATATTTATTCAGTGGATGTTTTAATTGAAAGTTCCTTTGTTTTAGTCCTTCCATATATTTTTGAGTCTATAATTTGATCGGAGGAAGCTTCCTGTTGTAAATGTTGTTGTTGTTGTTGTATTATTACTAAAACATGACACATCTTCTTTCATAATCAGTGTTCTATGCCTGGAA 1370 0.4613 MSLRKVFRSRKFSRSFKEVRALEEDEQRNRLGGGSDADGDSGESGEVVPAYGNAWSSMLPELLGEIIKRVEASQEQWPHRQNVVSCACVCKRWRELTRDIIRAPSQSGKITFPSCLKQPGPRDFSHQCLIKRNKRTSTFYLYLALTPSFTDKGKFLFAARRYRRGAHTEYIISLDADDLSQGSNAYVGKLSSDFLGTNFTIYDSQPPHNGAKPSSNRASRRFASKQISPQVPAGNFEVGQISYKFNLLKSRGPRRMICSLKCPASSSGESPDGRSLEDHNVNDKEQAATSCSILKNKAPRWHEHLQCWCLNFHGRVTVASVKNFQLVATVDQSQPGGKGDEETVLLQFGKVGDDTFTMDYRQPLSAFQAFAICLTSFGTKLACE 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g00815 384 PANTHER TUBBY-RELATED 50 382 - -
Bach9g00815 384 PRINTS Tubby superfamily signature 341 360 IPR000007 -
Bach9g00815 384 PRINTS Tubby superfamily signature 312 328 IPR000007 -
Bach9g00815 384 PRINTS Tubby superfamily signature 362 384 IPR000007 -
Bach9g00815 384 PRINTS Tubby superfamily signature 294 311 IPR000007 -
Bach9g00815 384 PRINTS Tubby superfamily signature 170 186 IPR000007 -
Bach9g00815 384 PRINTS Tubby superfamily signature 235 262 IPR000007 -
Bach9g00815 384 PRINTS Tubby superfamily signature 186 210 IPR000007 -
Bach9g00815 384 MobiDBLite consensus disorder prediction 23 44 - -
Bach9g00815 384 Pfam Tub family 116 379 IPR000007 -
Bach9g00815 384 ProSitePatterns Tub family signature 2. 369 384 IPR018066 -
Bach9g00815 384 Gene3D Tubby Protein; Chain A 111 384 IPR025659 -
Bach9g00815 384 ProSitePatterns Tub family signature 1. 312 325 IPR018066 -
Bach9g00815 384 CDD F-box_AtTLP-like 55 99 - -
Bach9g00815 384 Gene3D - 51 102 - -
Bach9g00815 384 SUPERFAMILY Tubby C-terminal domain-like 104 384 IPR025659 -
Bach9g00815 384 Pfam F-box domain 55 100 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g00815 Bach-Chr9 5754388 5758186 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach9g00815 1 384 TUB Transcription Factor Family AT1G53320 70.633 0.0 558
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TUB Bach9g00815 Tub 7.8e-102 CL0395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g00815 K19600 - qsa:O6P43_029189 642.499