Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g00783 ATGTTAATTATAGGAAATCATGCAGCAGCTGATGAAAGTTCAAACATATCTCAGGGCCATGTTAAGGTTATAATAGGAGCTATTATAGATAACAGCTCTCGTATTGGAAAAGAGGAGATAGTGGGTATAAAGATAGCATTGGAGGATTTCTTTCATCGCAGCAATCAAACTTTTGTTCTTCACCTAAGGAACTCTAAAGGGGACCCTCTTCAGGCAGCTCATGCAGCTAGAAATCTTATAAATAAACACAAAGTGCAAGCCATTATCGGACCACAAACATGGGAAGAGACAGCTTTAGTAGCTGAGATTTGCAGCCAAAAGAACACACCACTACTTTCTTTAGCTGATGCAATTCCTGAGTGGGCAACAGATAAGTGGCACTTCCTAGTTCAAGGCTCACCTACTCAGTTTGTGCTGATGAAAGCTGTGGCTGCTATTGTTCAGTCCTGGGAATGGCGTCAGGTTTACATAATCTATGAAGACAGAGATTCTTCATCCACTGGAGCTCTAGCTCATCTCTCAAGAGCACTCAGCGAAACCGGTATAGAAATAAGCGATCTTTTAGCCATCCCTCCTTTTGTTTCCTCTTCATTGACCCATAAACTTAACAGGCTTAGAGAAGGACAATGTAGAGTCTTTGTTGTCCATTTGTCCTTTCCTTTGGCCCTTCACTTTTTTGAAATAGCAAAAAGAATGAAAATGATGGAGAAAGATTATGTATGGATCACCACTGATTCCTTTTCTAGCCTTGTCCATTCCTTGAATGCATCCACTATCTCCTCCATGGAAGGGATTATTGGAGTCAAGAGTCACTTCCCACAAAAAGGGCTCAAATATGAAGATTTCTACCTTAGATTTAGCAAAAAGTTTAGCTTAGAGAATCCTCAAGAGTTTAACCATGAACCTGGGATCGTCGCAGCCCGGGCCTATGATGCTGCTTGGACTACGGCTCTGGCAATGACAGAAACCAATAAGGGCGGCCAAGTTTTGCTAGACAAGATTTTCCAAAGTAGTTTCACTGGTTTAAGTAGAAAAATTTACTTCACTGATCATAAATTAGCTCCTGAAAAGTCCTTTCAGATCATCAATCTGATGGGGAAGAGCTACGTGGAACTTGGATTCTGGACAAATGGACAGAATTTCTCGCAAAAGATTGGACAGAATGCTTCTTATAATTGTTCAATGAAGGAATTGGGACAAGTAATTTGGCCGGGGAGACCTTGGGATGCTCCAAGAGGATGGACCATACCAACTAGAGGTAAAGCATTAACAATTGGGGTCCCCTCTTTGTCTCCAGTGAAAGAGTTTGTCCAGGTAATTCCAGATCAGCCTGAAAATACTACCTCCTTCGAAGGTTTTGCTATAGATCTTTTTATAGAAACTGTAGGGTTGTTACCATTCCATCTGTCATACCAATTCTGTCCATTTGAAGGCACATATGATGATTTAGTGAAGCAAATTTACTTGAAGAATTTTGATGCAGTTGTTGGTGATGTCTCAATAGTATCGAGTCGGTATGAGTATGCTGAATTTTCTCAGCCCTACACCGATCCAGGATTTGTGATGATAGTCCCTCTTCAATCAAAGGCAGGCAATAAAACTTGGTTATTCGTGAAGCCTTTTACCATGACCATGTGGATTTTAATAGGGGTAATGATTGTTTACAATGGCTTTGTTCTATGGCTGATAGAAAAAAACCACTGCCCTGAACTCAAGGGCTCTGTGCTAAATCAATCCGGGACCATGATTTGGTTGGCTTTCACCACTCTCATCACCTTACATGGAGATAAGTTGCACAGCAATTTATCAAGGATGACTATGGTAATGTGGCTGTTTGTGGCACTAATCATAACACAGAGTTATACAGCTAACCTTGCCAGCATGTTGACAGTGGATCGGCTCGAACCCACAATAAATAATGTTGAGCAGCTAAGGAATAGCAATGCAATGGTTGGATATAGCAGAGGATCCTTCTTAAAAAATTATCTGCACAACGTGTTATACTTCAAACCTGCAAACCTCAAGCAATTTGGGTCAGCGGAAGAGTATGCCCAAGGCCTCAGAAGAAAAGAAATAGCAGCTTTCTTCATTGCAGTTGCTGAGTCCAAAATTTTCCTTGCAAAATACTGTAAAGAGTTTACTCAAGCTGGACCCATGTTCAAAATTGGAGGGTTTGGATTTGTATTCCCAAAAGGATCTCCATTGCTTCCTAGTGTAAACAAAGCCTTGCTAAAGGTTTCTGAAATTGGTAAGCTGCGCGAACTAGAAAACACAATGCTTGCATCAGTGGAATGTAAAGAGGCAGAACCAGATGGAGAAAATACAAGTCTTAGCCCCCACAGCTTCTGGGCACTCTTCATATTAACAGGAGGGACATCGACATTGGCTCTGTTGATTTATATTATTCGGATGAGCGATTCGGACCGCGGAAAGGAAACAATTTGGAGATTGATGATGGTGATGATTCAACACTGGGGAGCTCATCAGAGAAGATTCTCTGCAAGAGTCCATGATTTTGCAGAGCGTGATCATGTTGTAAACTCTCCAAACACATCAGTGTTGCCTTCTCAAGTTTGA 2577 0.4129 MLIIGNHAAADESSNISQGHVKVIIGAIIDNSSRIGKEEIVGIKIALEDFFHRSNQTFVLHLRNSKGDPLQAAHAARNLINKHKVQAIIGPQTWEETALVAEICSQKNTPLLSLADAIPEWATDKWHFLVQGSPTQFVLMKAVAAIVQSWEWRQVYIIYEDRDSSSTGALAHLSRALSETGIEISDLLAIPPFVSSSLTHKLNRLREGQCRVFVVHLSFPLALHFFEIAKRMKMMEKDYVWITTDSFSSLVHSLNASTISSMEGIIGVKSHFPQKGLKYEDFYLRFSKKFSLENPQEFNHEPGIVAARAYDAAWTTALAMTETNKGGQVLLDKIFQSSFTGLSRKIYFTDHKLAPEKSFQIINLMGKSYVELGFWTNGQNFSQKIGQNASYNCSMKELGQVIWPGRPWDAPRGWTIPTRGKALTIGVPSLSPVKEFVQVIPDQPENTTSFEGFAIDLFIETVGLLPFHLSYQFCPFEGTYDDLVKQIYLKNFDAVVGDVSIVSSRYEYAEFSQPYTDPGFVMIVPLQSKAGNKTWLFVKPFTMTMWILIGVMIVYNGFVLWLIEKNHCPELKGSVLNQSGTMIWLAFTTLITLHGDKLHSNLSRMTMVMWLFVALIITQSYTANLASMLTVDRLEPTINNVEQLRNSNAMVGYSRGSFLKNYLHNVLYFKPANLKQFGSAEEYAQGLRRKEIAAFFIAVAESKIFLAKYCKEFTQAGPMFKIGGFGFVFPKGSPLLPSVNKALLKVSEIGKLRELENTMLASVECKEAEPDGENTSLSPHSFWALFILTGGTSTLALLIYIIRMSDSDRGKETIWRLMMVMIQHWGAHQRRFSARVHDFAERDHVVNSPNTSVLPSQV 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g00783 858 Pfam Bacterial extracellular solute-binding proteins, family 3 447 757 IPR001638 -
Bach9g00783 858 Gene3D - 693 767 - -
Bach9g00783 858 Gene3D - 422 533 - -
Bach9g00783 858 SMART GluR_14 422 762 IPR001320 GO:0015276|GO:0016020
Bach9g00783 858 SUPERFAMILY Periplasmic binding protein-like II 400 757 - -
Bach9g00783 858 Gene3D - 310 421 - -
Bach9g00783 858 FunFam Glutamate receptor 534 672 - -
Bach9g00783 858 Gene3D - 139 299 - -
Bach9g00783 858 Pfam Receptor family ligand binding region 44 364 IPR001828 -
Bach9g00783 858 Gene3D - 534 665 - -
Bach9g00783 858 PIRSF IGluLR_plant 1 816 IPR017103 -
Bach9g00783 858 CDD PBP1_GABAb_receptor_plant 25 385 IPR044440 -
Bach9g00783 858 Pfam Ligand-gated ion channel 758 791 IPR001320 GO:0015276|GO:0016020
Bach9g00783 858 SUPERFAMILY Periplasmic binding protein-like I 23 414 IPR028082 -
Bach9g00783 858 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 24 804 IPR015683 -
Bach9g00783 858 FunFam Glutamate receptor 139 300 - -
Bach9g00783 858 CDD GluR_Plant 421 760 - -
Bach9g00783 858 FunFam Glutamate receptor 418 533 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g00783 Bach-Chr9 5497787 5500981 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach9g00783 22 856 Ion Channels AT2G29110 33.751 5.00e-151 466
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g00783 - - qsa:O6P43_029155 1082.4