Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g00746 ATGTATATATCTTGGCCTTCATGCAACTATAAGTGGATAATGATGGAGGGTTCTTCTGGGTCTGCTTGGCCGAGGTCTGATAGTTCTAGAGCATTGAATACCTCTGGAGTTTCAGACAGGAACCCGAGGCTTGTTTGTCCTGAAAGAATACCTTTTTCTGGTGAGGCATCTTGCGATTCCGGCTTTAGAAAGGAAAGAGATAATAGGGTTGTGTTGGGTCAAGGTGATCACCCTAAACACCTAGGTGGTTTCTCTGGGGTTTGTGAGGATGAAGTAGCAGCTGACCCTTTTATTCGTCCTATAGAATGGGGTGATATAAGCTTAAGGCAATGGTTAGATAAACCTGATCGATCCGTAGATGTCTTTGAATGTTTGCACATATTTAGGCAAATAGTAGAAATTGTTAATATAGCCCATTCTCAAGGAATTGTTGTTCATAACGTGAGGCCTTCCTGCTTTGTCATGTCTTCTTTCAATCACGTCTCCTTCATTGAGTCGGCCTCTTGTTCAGATTCTGGTTCAGATTCTTTAGAAGATGGATTGAACAATCGGCCTGTTGAGAACAAAAATCCAGCATCTCCGTGTCCCCGTGATATGCTTCAGCAGAGGAGTTTAGGAAGTGAAAATTTTTTACCTGCCAAAGCGTCAACTACTGCTTTGTCAGAATCTAGTTTCATGTTGTCAAGTGCAGTCTATGCAGCACGTGCATCATTAATAGAAGATACTGAAGAACATAAAACCAAAGAAAGGAGAAAGGTTGAAGAAGTAGAAGGGAAAAAGCAATCATTTCCAATGAAACAAATACTGCTAATGGAGACAAGTTGGTACACTAGTCCTGAAGAGGTGGCTGGTGCTCAAAGTTCCTGTGCTTCAGACATTTACAGATTGGGGGTTCTCCTTTTTGAGTTATTCTGTCCGCTCAGCTCAAGAGAAGAAAAGAGCAGAACCATGTCTAGCCTTAGACATAGAGTTCTTCCTCCACAGTTACTACTGAAGTGGCCTAAAGAAGCTTCGTTTTGTTTGTGGTTACTTCATCCCGAGCCTAGTAGTCGTCCCACACTTGGGGAGTTATTACAGAGTGAGTTCCTCAATGAACAGAGAGATGATATGGAAGAACGTGAAGCAGCTATAGAGCTTAGAGAAAAGATAGAGGAACAGGAGTTGTTGCTAGAATTCCTTCTATTACTTCAGCAGAGGAAAGAAGAAGTTGCTGATAAATTGCAACAAACTGTTTCTTTTTTGTCTTCAGATGTTGAAGAAGTGACCAAGCAGCAAATGAGATTTAAAGAAAAAACTGGTTCTGAACTAGGGAGTGATGATCGGTCAGCGTCAAATTTTCCATCCACAACAGTTGTTGATAGTGAAGATTCTGCTTTCCTAGGAACCAGGAAACGGGTCAGACCAGGGATGAATGTTTACTGTATTGAGGGATGTGATGATAATATAGGAGATGATGAAAAAAATCCTGGAAGTGTTCTTTCAAAAAGTTCTCGGCTGATGAAGAACTTTAAGAAACTTGAGTCTGCGTACTTTTTAACGAGATGCAAACCAACCTACTCATCAGGGAGACCAGTGGTTAGAAATTCACCGTTATCTACTGATGGTAGGGGCTCTGTTGTTGTGACTGAAAGAAGTTATGTCAGTAACTTGGCATCAAAAGAGAAGGGCAGGGATGATAGAAGTGGTTGGATAAACCCTTTCCTCGAGGGTTTGTGCAAATATCTTTCTTTTAGTAAGCTAAAGGTGAAGGCTGACCTAAAGCAGGGAGATCTTTTGCATTCTTCCAACCTAGTATGCTCGCTCAGTTTTGATCGTGATGGAGAATTTTTTGCCACTGCAGGCGTAAATAAGAAAATCAAAGTATTTGAATGTGACTCAATCATAAATGAGGATCGTGATATCCATTATCCAGTAGTTGAGATGCCTAGCAGGTCAAAGTTGAGTAGTATATGTTGGAACACTTATATCAAAAGTCAAATTGCTTCAAGTAACTTTGAAGGTGTAGTACAGTTATGGGATGTCACAAGAAGTCAATTGCTGTCGGAAATGAGGGAGCATGAGCGGCGGGTGTGGTCGGTTGATTTCTCAGCAGCAGACCCAACAATGTTGGCTAGCGGGAGCGATGACGGTTCTGTTAAGCTATGGAGTATCAATCAGGCAATTCTATTCTTGCACTTGGGAGTTAGTGTTGGAACCATCAAAACAAAGGCAAACGTGTGCTGTGTCCAGTTTCCCCTGGATACTAGTCGTTTCCTTGCATTTGGCTCAGCGGATCATCGAATATATTACTATGATCTACGTAACCTAAAAATGCCTCTTTGTACTTTAGTTGGACATAATAAGACCGTGAGCTACGTCAAGTTTGTGGACCCTATGAACCTTGTCTCTTCATCCACGGACAACACTTTGAAGCTTTGGGATTTGTCTTCGTGCACATCTCGAGTTATAGATACTCCGGTTCAATCATTCACAGGTCACATTAATGTGAAGAATTTTGTGGGGTTGTCAGTATCTGATGGTTACATTGCGACTGGTTCAGAGACAAATGAGGTGTTCATATACCATAAAGCTTTTCCCATGCCAGCATTGTCCTTCAAGTTTCAAAACACAGATCCACTTTCTGGGCAGGAAATGAATGATCCTGCACAGTTCATCTCTTCTGTTTGCTGGCGCGGTCAGTCTTCGACCTTAGTTGCTGCAAATTCCACAGGGAACATCAAAATTCTGGAGATGGTGTAA 2739 0.4177 MYISWPSCNYKWIMMEGSSGSAWPRSDSSRALNTSGVSDRNPRLVCPERIPFSGEASCDSGFRKERDNRVVLGQGDHPKHLGGFSGVCEDEVAADPFIRPIEWGDISLRQWLDKPDRSVDVFECLHIFRQIVEIVNIAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSLEDGLNNRPVENKNPASPCPRDMLQQRSLGSENFLPAKASTTALSESSFMLSSAVYAARASLIEDTEEHKTKERRKVEEVEGKKQSFPMKQILLMETSWYTSPEEVAGAQSSCASDIYRLGVLLFELFCPLSSREEKSRTMSSLRHRVLPPQLLLKWPKEASFCLWLLHPEPSSRPTLGELLQSEFLNEQRDDMEEREAAIELREKIEEQELLLEFLLLLQQRKEEVADKLQQTVSFLSSDVEEVTKQQMRFKEKTGSELGSDDRSASNFPSTTVVDSEDSAFLGTRKRVRPGMNVYCIEGCDDNIGDDEKNPGSVLSKSSRLMKNFKKLESAYFLTRCKPTYSSGRPVVRNSPLSTDGRGSVVVTERSYVSNLASKEKGRDDRSGWINPFLEGLCKYLSFSKLKVKADLKQGDLLHSSNLVCSLSFDRDGEFFATAGVNKKIKVFECDSIINEDRDIHYPVVEMPSRSKLSSICWNTYIKSQIASSNFEGVVQLWDVTRSQLLSEMREHERRVWSVDFSAADPTMLASGSDDGSVKLWSINQAILFLHLGVSVGTIKTKANVCCVQFPLDTSRFLAFGSADHRIYYYDLRNLKMPLCTLVGHNKTVSYVKFVDPMNLVSSSTDNTLKLWDLSSCTSRVIDTPVQSFTGHINVKNFVGLSVSDGYIATGSETNEVFIYHKAFPMPALSFKFQNTDPLSGQEMNDPAQFISSVCWRGQSSTLVAANSTGNIKILEMV 912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g00746 912 ProSiteProfiles Trp-Asp (WD) repeats profile. 776 810 IPR001680 GO:0005515
Bach9g00746 912 MobiDBLite consensus disorder prediction 429 449 - -
Bach9g00746 912 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 683 718 - -
Bach9g00746 912 SMART serkin_6 12 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach9g00746 912 SUPERFAMILY Protein kinase-like (PK-like) 80 372 IPR011009 -
Bach9g00746 912 PRINTS G protein beta WD-40 repeat signature 794 808 IPR020472 -
Bach9g00746 912 PRINTS G protein beta WD-40 repeat signature 660 674 IPR020472 -
Bach9g00746 912 PRINTS G protein beta WD-40 repeat signature 703 717 IPR020472 -
Bach9g00746 912 Coils Coil 239 259 - -
Bach9g00746 912 SUPERFAMILY WD40 repeat-like 593 909 IPR036322 GO:0005515
Bach9g00746 912 ProSitePatterns Trp-Asp (WD) repeats signature. 794 808 IPR019775 -
Bach9g00746 912 PANTHER PROTEIN SPA1-RELATED 2 80 912 IPR044630 GO:0009640
Bach9g00746 912 MobiDBLite consensus disorder prediction 169 198 - -
Bach9g00746 912 ProSiteProfiles Trp-Asp (WD) repeats profile. 683 718 IPR001680 GO:0005515
Bach9g00746 912 ProSiteProfiles Protein kinase domain profile. 8 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach9g00746 912 Gene3D Transferase(Phosphotransferase) domain 1 105 375 - -
Bach9g00746 912 SMART WD40_4 676 716 IPR001680 GO:0005515
Bach9g00746 912 SMART WD40_4 588 623 IPR001680 GO:0005515
Bach9g00746 912 SMART WD40_4 816 855 IPR001680 GO:0005515
Bach9g00746 912 SMART WD40_4 726 765 IPR001680 GO:0005515
Bach9g00746 912 SMART WD40_4 769 807 IPR001680 GO:0005515
Bach9g00746 912 SMART WD40_4 634 673 IPR001680 GO:0005515
Bach9g00746 912 SMART WD40_4 871 910 IPR001680 GO:0005515
Bach9g00746 912 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 776 810 - -
Bach9g00746 912 FunFam E3 ubiquitin-protein ligase RFWD2 isoform X1 566 912 - -
Bach9g00746 912 Pfam WD domain, G-beta repeat 772 807 IPR001680 GO:0005515
Bach9g00746 912 Pfam WD domain, G-beta repeat 678 716 IPR001680 GO:0005515
Bach9g00746 912 Pfam WD domain, G-beta repeat 593 622 IPR001680 GO:0005515
Bach9g00746 912 Coils Coil 360 380 - -
Bach9g00746 912 Coils Coil 404 424 - -
Bach9g00746 912 Gene3D - 569 912 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g00746 Bach-Chr9 5238115 5244345 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach9g00746 673 854 Miscellaneous Gene Families AT5G08390 28.571 1.06e-06 50.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK PEK_PEK Bach9g00746 WD40 0.00013 CL0186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g00746 K26557 - gmx:100811457 1459.89