Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g00733 ATGGCTGAGATGACAGAATTGTTCCCCATTGGCAAATTATTTGAGTGCTTGCCTCCTCTGTATGAGTATACCATCACAATTGATTTTCCAAGCTCCATTGTTTTCTGTGTCTTGGTCATTTTCTTCTTTCGCCTCTTGTACCACATTCTGCATGGCTTGTTTTACTGGTACATTGAGAATGAGACTGATCGGGAAGATCTTGAACAAGGAATTCGCTCTGCATATCCTTCTAACCAGCTTGCAATTTTTCAAGTTCTTACGGGGACCAATCTGCGGCGGGGATGGAGAATTGTTGAAGGATTAGAACGAGGGCAGAGGCTAAGAGACTCAAGGAAATTGCCTCCTCTGGTTAACTACGGAAGCCATGATGAAGTGGTGAAAACTTTGGGTGATTGTGCCATTTGCTTGGAGGATTTCAAAGTTGGCGAGTTCTGTCAAGTTTTCCCACAGTGCAAACACATTTTTCATTCACATTGTATAGATTTCTGGTTACAGAAAAAGCTAACATGCCCAATTTGTCGTAGTTATATACAAGATTAA 540 0.4148 MAEMTELFPIGKLFECLPPLYEYTITIDFPSSIVFCVLVIFFFRLLYHILHGLFYWYIENETDREDLEQGIRSAYPSNQLAIFQVLTGTNLRRGWRIVEGLERGQRLRDSRKLPPLVNYGSHDEVVKTLGDCAICLEDFKVGEFCQVFPQCKHIFHSHCIDFWLQKKLTCPICRSYIQD 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g00733 179 Pfam Ring finger domain 131 174 IPR001841 -
Bach9g00733 179 ProSiteProfiles Zinc finger RING-type profile. 132 174 IPR001841 -
Bach9g00733 179 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 102 178 IPR013083 -
Bach9g00733 179 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 33 177 - -
Bach9g00733 179 CDD RING-H2_PA-TM-RING 131 174 - -
Bach9g00733 179 SUPERFAMILY RING/U-box 131 177 - -
Bach9g00733 179 SMART ring_2 132 173 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g00733 Bach-Chr9 5177574 5178113 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach9g00733 66 174 C3H Transcription Factor Family AT1G53010 40.351 1.48e-19 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g00733 - - gmx:102660073 194.512