Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g00728 ATGGCAGCAGGCGCCAGACGCGGTGAATGCGCCATCATCACATTGTTAATACAAGGGCATTACAACGATTCCGCTCACTGTTTCCGTAACATAATCTTCTTCCTCCACCTCTCACTCTCATCCATTGCATTCTGTACACTTCAATTCTATGCCCCTTTTCTCTTCCTACCCTTTTCTTCATCGCCATTCGAGCTAGCTCTAATTTCTTATACCCGTTACGTTCTTCGTCGATTTCTGGTTTTCTTCTATAAAGGCCACATTGCTATGGAACAAAATTTGTTGGAACATGCATGCTCGGACTCTGATGTGGGTGTCTCGCATAAGAAAATTTTGAATTCTATACCAGCCCATACCACAGTCCGTGATAGTGATACTGATAATGATTGCTTTGATTGCAATATTTGCTTGGACCCTGCGCATGACCCTGTGGTCACTCTCTGTGGTCATCTCTACTGCTGGCCATGCATATACAGGTGGCTTCAAGTCCAGAGCTCCTCTGATGAATCAGAACAACAGCAGAAATGCCCAGTTTGTAAAGCCAACATCTCTCTTACCTCATTGGTTCCCCTTTATGGCCGAGGAAATTCAATTTCTGATGCGAGAAGAACCCAGATGGATCTGGAAATACCTAGAAGGCCGCCACCTCCTTATAGCTTGAATTCAATGTTAACTTCTGCGAGTGCATCTACTTCTCATCCTGGTCAACAACTCCATCCAAATCATTTTCAGTCACAACCTCATCCATTTCAATATCAGCAATACTTCCCTCACCTTTATAGAGGCTATACTTCATATGGATCACCTTATCATGGAGCTGCAGCTATGACTGCTTTATTTGATCCCTTGATTGGCATGTTTGGGCAGATGGTTCTTGCAAGGATGCATGGGAGCTCCGGTGCAAATTTGTTTTCTTACCGTTACATAAATTCTTACCCTCGTTATGGAAGTGGCAGTCCTAGAATGAGAAGGCAGGAAATGCAGGTTGACAAGTCTCTGAACAGAGTATCTATCTTTCTTCTCTGCTGCATCATTTTGTGTCTTATCTTATTCTGA 1053 0.4349 MAAGARRGECAIITLLIQGHYNDSAHCFRNIIFFLHLSLSSIAFCTLQFYAPFLFLPFSSSPFELALISYTRYVLRRFLVFFYKGHIAMEQNLLEHACSDSDVGVSHKKILNSIPAHTTVRDSDTDNDCFDCNICLDPAHDPVVTLCGHLYCWPCIYRWLQVQSSSDESEQQQKCPVCKANISLTSLVPLYGRGNSISDARRTQMDLEIPRRPPPPYSLNSMLTSASASTSHPGQQLHPNHFQSQPHPFQYQQYFPHLYRGYTSYGSPYHGAAAMTALFDPLIGMFGQMVLARMHGSSGANLFSYRYINSYPRYGSGSPRMRRQEMQVDKSLNRVSIFLLCCIILCLILF 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g00728 350 SMART ring_2 132 178 IPR001841 -
Bach9g00728 350 ProSitePatterns Zinc finger RING-type signature. 147 156 IPR017907 -
Bach9g00728 350 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATED 118 348 IPR045103 GO:0005783|GO:0006511|GO:0061630
Bach9g00728 350 CDD RING-HC_AtRMA-like 130 180 - -
Bach9g00728 350 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 106 241 IPR013083 -
Bach9g00728 350 ProSiteProfiles Zinc finger RING-type profile. 132 179 IPR001841 -
Bach9g00728 350 Pfam RING-type zinc-finger 132 176 IPR027370 -
Bach9g00728 350 SUPERFAMILY RING/U-box 126 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g00728 Bach-Chr9 5157800 5159751 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach9g00728 101 336 C3H Transcription Factor Family AT4G27470 41.463 2.31e-50 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g00728 K10666 - qsa:O6P43_029094 281.567